BAC Information

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BAC

Clone NameB6Ng01-344N01
Chromosome10 (Build37)
Map Location 27,137,081 - 27,138,142
singlet/doubletsinglet
Overlap geneLama2
Upstream geneLOC667572, LOC100040349, Arhgap18
Downstream geneLOC100040385, LOC100040961, LOC100040401, Ptprk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-344N01.bB6Ng01-344N01.g
ACCGA127203GA127204
length1,060893
definitionB6Ng01-344N01.b B6Ng01-344N01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagggagcagagtagctcactgtgagctgtgataacactggca
catcaagtattagggcttggcatggagggagagggatgaccatggggaga
taaccagtgtgttgttatcccggctgaaaaccatgggaggctttgaggaa
aaagcctttggagtttaattttagaaaaaggtaattttgtatcatcagtg
ctgagaggactcagcaggaatttgctttcctttagtcagagagaatgatc
tggaattcagtaatagaagttgtaggctataaggcagcaggccacaggga
gcctgcattaagttgtgagtccagccacaggagaaagctctaatgggcac
ccatatgcagacatgcctccccagcaggctgcagagcgtcacactcctac
aatgagtgttgcatctgcagaaaataggtgctgctacaagctccagagaa
ctcctcacaggggctgtcaatggagatatcactgagaagtcaaattcact
tataaacctcataaatcacttcctaaagaaggttttgggaatgatagcct
ctcgcttatttaatacatatgacagggacatgggaagcatgttttaaata
tgtgttccaggtgcctctggttgtgaactctctccttcctggctttcttt
ccagacaattccagcttcctcaacccctgaagaggaacagagtaatgggt
cacttaaggaaagagtgttggtgatttatagctgaagaaagataataagc
aggaaacctagtaagattcagtgaatggagtctctgggtggttgaaagct
gaatacgtagcctcgaccttactcagttattgatggttgaagaggcacat
gagacaggaattacactgacagggttgagggacatacctatgtggatggg
taatgctttagcaattcaaaaatcaaaattgtaatcaatgtttttttgta
tatgaattttccttgcctgtggctagggattattacttttatgtattgga
tagatactagaccaaataactgaatatgcatggttccatgggtgatgtcg
catcaccttc

gaattcatcttggtagtttttcctttgacgagcatgaagtatccttatct
tttttgataacttttggttaaaagtcaactttattcgatattagaatggc
tactctagcttttttcttgggaccattttcttggaatttttttcccaacc
ttttattctgaggtaacatctgtctttttcactgaagtgaatttcctgta
tgtgacaaaatgatggttcctgtttaatgtatctagtctgtgagtctatg
tctttttattggggaattgagttcattgacattaagagatattaaggaaa
atgattgttgcttcctgtgttatctttgttttagtgatggaattatgttt
gtgtggccatctttttttttttttttttttttggcgttgttgaaagaaga
tcactttcttgctttttctaggatgtagtttcactccttgagtttgagtt
ttccatctattatcctttgtacagctagattgtggagagaaattgtgtaa
attttgtttttcatggaatattttggtttttccatctatggtaattgaga
gttttgctgggtatagtagcctaggcaggcatttgttttctcttaggttc
tgtatgacatctgctcaggatcttctggattttagagtctctggtgaaaa
atctggtgtaactctgataggtctgtctttatatgttactttgacctttt
ttccttactgcttttagtattctctctttgttttctgcattttgtgtttt
gactcttatgtaatggaaggagtttcttttcttgtccagtccatttggga
gttctgtccggcttcttgtatgtttatgggcatctttttttctttaatgt
aggaaagttttcctctattaattttgttgaagaaattttactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_27137081_27138142
seq2: B6Ng01-344N01.b_50_1109 (reverse)

seq1  GAAGTTGATGCGACATCA-CCATGGAAACCATGCATATTCAGTTATTTGG  49
      |||| ||||||||||||| |||||| ||||||||||||||||||||||||
seq2  GAAGGTGATGCGACATCACCCATGG-AACCATGCATATTCAGTTATTTGG  49

seq1  TCTAGTATCTATCCAAATACATTAAAAGTAATAAT-CCTAGCCACAGGGC  98
      |||||||||||||| |||||| ||||||||||||| |||||||||| |||
seq2  TCTAGTATCTATCC-AATACA-TAAAAGTAATAATCCCTAGCCACA-GGC  96

seq1  AAGAAAAATTCATATAACAAAAAAACATTGATTACAATTTTGATTTTTGA  148
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATTCATAT-ACAAAAAAACATTGATTACAATTTTGATTTTTGA  145

seq1  ATTGCTAAAGCATTA-CCATCCACATAGGTATGTCCCTCAACCCTGTCAG  197
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTGCTAAAGCATTACCCATCCACATAGGTATGTCCCTCAACCCTGTCAG  195

seq1  TGTAATTCCTGTCTCATGTGCCTCTTCAACCATCAATAACTGAGTAAGGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCCTGTCTCATGTGCCTCTTCAACCATCAATAACTGAGTAAGGT  245

seq1  CGAGGCTACGTATTCAGCTTTCAACCACCCAGAGACTCCATTCACTGAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTACGTATTCAGCTTTCAACCACCCAGAGACTCCATTCACTGAAT  295

seq1  CTTACTAGGTTTCCTGCTTATTATCTTTCTTCAGCTATAAATCACCAACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAGGTTTCCTGCTTATTATCTTTCTTCAGCTATAAATCACCAACA  345

seq1  CTCTTTCCTTAAGTGACCCATTACTCTGTTCCTCTTCAGGGGTTGAGGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCTTAAGTGACCCATTACTCTGTTCCTCTTCAGGGGTTGAGGAA  395

seq1  GCTGGAATTGTCTGGAAAGAAAGCCAGGAAGGAGAGAGTTCACAACCAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAATTGTCTGGAAAGAAAGCCAGGAAGGAGAGAGTTCACAACCAGA  445

seq1  GGCACCTGGAACACATATTTAAAACATGCTTCCCATGTCCCTGTCATATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTGGAACACATATTTAAAACATGCTTCCCATGTCCCTGTCATATG  495

seq1  TATTAAATAAGCGAGAGGCTATCATTCCCAAAACCTTCTTTAGGAAGTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATAAGCGAGAGGCTATCATTCCCAAAACCTTCTTTAGGAAGTGA  545

seq1  TTTATGAGGTTTATAAGTGAATTTGACTTCTCAGTGATATCTCCATTGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGGTTTATAAGTGAATTTGACTTCTCAGTGATATCTCCATTGAC  595

seq1  AGCCCCTGTGAGGAGTTCTCTGGAGCTTGTAGCAGCACCTATTTTCTGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGTGAGGAGTTCTCTGGAGCTTGTAGCAGCACCTATTTTCTGCA  645

seq1  GATGCAACACTCATTGTAGGAGTGTGACGCTCTGCAGCCTGCTGGGGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACACTCATTGTAGGAGTGTGACGCTCTGCAGCCTGCTGGGGAGG  695

seq1  CATGTCTGCATATGGGTGCCCATTAGAGCTTTCTCCTGTGGCTGGACTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGCATATGGGTGCCCATTAGAGCTTTCTCCTGTGGCTGGACTCA  745

seq1  CAACTTAATGCAGGCTCCCTGTGGCCTGCTGCCTTATAGCCTACAACTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAATGCAGGCTCCCTGTGGCCTGCTGCCTTATAGCCTACAACTTC  795

seq1  TATTACTGAATTCCAGATCATTCTCTCTGACTAAAGGAAAGCAAATTCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGAATTCCAGATCATTCTCTCTGACTAAAGGAAAGCAAATTCCT  845

seq1  GCTGAGTCCTCTCAGCACTGATGATACAAAATTACCTTTTTCTAAAATTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTCCTCTCAGCACTGATGATACAAAATTACCTTTTTCTAAAATTA  895

seq1  AACTCCAAAGGCTTTTTCCTCAAAGCCTCCCATGGTTTTCAGCCGGGATA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAAAGGCTTTTTCCTCAAAGCCTCCCATGGTTTTCAGCCGGGATA  945

seq1  ACAACACACTGGTTATCTCCCCATGGTCATCCCTCTCCCTCCATGCCAAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACACTGGTTATCTCCCCATGGTCATCCCTCTCCCTCCATGCCAAG  995

seq1  CCCTAATACTTGATGTGCCAGTGTTATCACAGCTCACAGTGAGCTACTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATACTTGATGTGCCAGTGTTATCACAGCTCACAGTGAGCTACTCT  1045

seq1  GCTCCCTTGGAATTC  1062
      |||||||||||||||
seq2  GCTCCCTTGGAATTC  1060


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