BAC Information

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BAC

Clone NameB6Ng01-347B14
Chromosome10 (Build37)
Map Location 81,741,261 - 81,847,870
singlet/doubletdoublet
Overlap geneLOC100042718, EG237412
Upstream geneTjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes, Tle2, Tle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik
Downstream geneLOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik, Txnrd1, Eid3, EG216185, Chst11, Slc41a2, D10Wsu102e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347B14.bB6Ng01-347B14.g
ACCGA128807GA128808
length1,1601,154
definitionB6Ng01-347B14.b B6Ng01-347B14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,846,692 - 81,847,870)(81,741,261 - 81,742,425)
sequence
gaattcacaacagaggaatcttgaatggcagagaagtacttaaagagatg
ttcaaagtcctcaatcatctgagaaatgcaaatcaaaacaatcctgagag
tccaccttactccaatcaggatggctgagatcaaaaactcaagtgacaac
acaagctgtcaaggatgtcaagaaaaaagtacactcctccattgctggtg
ggattgcaaactggtacagagtggttactctggaaatcaatctggcggtt
cctcagaactaatactattaaatgattagatttagggatagctgtggatt
aaggtaaacaagtctgtaaagctctcattgtccagttcatattttctaac
cattatggtgtaaataaattcattccaaagcttacccttttgtgctataa
ttcttgtaggacacattttagtagaaaaataagtaattttagactcaatg
atgaatccacatgacacacaaaaaggcctattttggtctgaattcaaata
cctataactatttttgactctcaaaaaaatgtgcaggaactatccaatgc
tgtctctcgttctatagttttaaatagattggttactgcataattaaatg
ttaatttatttttgattttgcttaatttgtactagaaataccagtctcag
ttcatgaggtcagaaaggaattgggaaatgaagttagctttttcacagac
actacattctcattaaaatggagagaattcaaaattatattgattagtaa
aatactcaacaaatacatgttccagggtttagggttttttgtttttgttt
ttttgatttttgtttttgtttttttccagaaaatggatatgtatctaaaa
gaaactccagttaggaaggtgaaggagccatcacctgaatagattttgcc
tgtataaagaaattcatcttatttgcttcttctgccaattttaaagtttg
ataatacaattatatttattcatgaaattctctattatttcttcatgatt
gatatcctatcttcttattgtctgtaacagtgcacattaataagtgtcca
acttgaacagggtcttttcttcaatttatatgtcttcataacttcttcat
ctaagttcatctttctggaaccagagttctacattacaagtatataacag
gtgttagttt
gaattctttactatcaagagaggacttagaaatttccatcttctgtctca
tgaataagcgtgagcctgggggaaatgaatagtttacaagattagcagga
ttaacatgctagattaagtcaagactgttaagagtctcgcctgggctact
acctttagtttttaaaagactgaacaaaaagcaattctcacgtatgttgt
ataatctatcaacccaaggcagttctatgtattaaaaatgatactaaatg
atattataacaatatgtgctctattatgatggaatgcttaacattagtga
ctttttaaattttaattttatttgtaattcattttttacaccccatattc
cattccctgcctctcccctcccacccttcaaatgcttcacatcccacacc
tcctccccattacgcccagtctccacacggacagccctaccctccacccc
atctgacctctaaactccctggggcctccagtctctcgagagttagagag
ttagacctgtaagtcctctactgtatgtgtgttggaggcctcatatcagc
tggtgtatgctgtctgtttggtggtccagtgtttgaaaaatctcgggggt
tcagattaattaagattgctggtcctcctataggaaagtgattggtgact
ttataattaatcactggtatagcaaatctcagcttctaatcacagatgaa
aaggttagcctattttcaactctttttggattaagaattttttaatgact
tattttatgtatatgaacatactgttgtatcttcagacacaccagaaggg
gcattgaatcccattatagattgttctgagccaccatgtgtctgctggta
attgaactcaggacctctggaagagtaatcaatgctcttaaccactgcac
catctctccagcctggattaagaatttttaagaacctctagcccagtggt
tctaaatgtgtttgttctaagaccagtgaaaaacactgatatttacatta
ttgttcatacagtagcaaattagtatgcagaagcaagccaatattgtggt
ggtggaggtgaccacacatggagtctatctgtatacaggtcacagcatgg
aagctgagatccgcctgctctgtagctatttcttctaagttacatattgt
agat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81846692_81847870
seq2: B6Ng01-347B14.b_50_1209 (reverse)

seq1  AAACT-ACAACTGTTATATTACTTGTAAATTGTTTAGAACTCCTGGTTTC  49
      ||||| ||| |||||||| |||||||||    | ||||||| |||| |||
seq2  AAACTAACACCTGTTATA-TACTTGTAA----TGTAGAACT-CTGG-TTC  43

seq1  CAG-AAGATGGAACTTTAGATGAAGAAGTATTGAAAGGACATATAAATTG  98
      ||| ||||| |||| ||||||||||||||  ||||  |||||||||||| 
seq2  CAGAAAGAT-GAAC-TTAGATGAAGAAGTTATGAA--GACATATAAATT-  88

seq1  GAGGAAAAGACCCCTGTTCAAGTTTGGACCACTTATTAATGTGCACTGTT  148
      || ||||||| ||||||||||| ||||| |||||||||||||||||||||
seq2  GAAGAAAAGA-CCCTGTTCAAG-TTGGA-CACTTATTAATGTGCACTGTT  135

seq1  AACAGAACAATTAAGGAAGATAAGGATATCAATCATGAAGAAATAATAGA  198
       |||| |||||  | |||||| ||||||||||||||||||||||||||||
seq2  -ACAG-ACAAT--AAGAAGAT-AGGATATCAATCATGAAGAAATAATAGA  180

seq1  GAATTTCATGAATAAATATAATTGTTATTATCAAACTTTAAAATTGGCAG  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAATTTCATGAATAAATATAATTG-TATTATCAAACTTTAAAATTGGCAG  229

seq1  AAGAAGCAAATAAGATGAATTTCTTTATACAGGCAAAATCTATTCAGGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAAATAAGATGAATTTCTTTATACAGGCAAAATCTATTCAGGTG  279

seq1  ATGGCTCCTTCACCTTCCTAACTGGAGTTTCTTTTAGATACATATCCATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCTTCACCTTCCTAACTGGAGTTTCTTTTAGATACATATCCATT  329

seq1  TTCTGGAAAAAAACAAAAACAAAAATCAAAAAAACAAAAACAAAAAACCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAAAAAACAAAAACAAAAATCAAAAAAACAAAAACAAAAAACCC  379

seq1  TAAACCCTGGAACATGTATTTGTTGAGTATTTTACTAATCAATATAATTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCCTGGAACATGTATTTGTTGAGTATTTTACTAATCAATATAATTT  429

seq1  TGAATTCTCTCCATTTTAATGAGAATGTAGTGTCTGTGAAAAAGCTAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTCTCCATTTTAATGAGAATGTAGTGTCTGTGAAAAAGCTAACT  479

seq1  TCATTTCCCAATTCCTTTCTGACCTCATGAACTGAGACTGGTATTTCTAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCCAATTCCTTTCTGACCTCATGAACTGAGACTGGTATTTCTAG  529

seq1  TACAAATTAAGCAAAATCAAAAATAAATTAACATTTAATTATGCAGTAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTAAGCAAAATCAAAAATAAATTAACATTTAATTATGCAGTAAC  579

seq1  CAATCTATTTAAAACTATAGAACGAGAGACAGCATTGGATAGTTCCTGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATTTAAAACTATAGAACGAGAGACAGCATTGGATAGTTCCTGCA  629

seq1  CATTTTTTTGAGAGTCAAAAATAGTTATAGGTATTTGAATTCAGACCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTGAGAGTCAAAAATAGTTATAGGTATTTGAATTCAGACCAAA  679

seq1  ATAGGCCTTTTTGTGTGTCATGTGGATTCATCATTGAGTCTAAAATTACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCTTTTTGTGTGTCATGTGGATTCATCATTGAGTCTAAAATTACT  729

seq1  TATTTTTCTACTAAAATGTGTCCTACAAGAATTATAGCACAAAAGGGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTACTAAAATGTGTCCTACAAGAATTATAGCACAAAAGGGTAA  779

seq1  GCTTTGGAATGAATTTATTTACACCATAATGGTTAGAAAATATGAACTGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGAATGAATTTATTTACACCATAATGGTTAGAAAATATGAACTGG  829

seq1  ACAATGAGAGCTTTACAGACTTGTTTACCTTAATCCACAGCTATCCCTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAGAGCTTTACAGACTTGTTTACCTTAATCCACAGCTATCCCTAA  879

seq1  ATCTAATCATTTAATAGTATTAGTTCTGAGGAACCGCCAGATTGATTTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATCATTTAATAGTATTAGTTCTGAGGAACCGCCAGATTGATTTCC  929

seq1  AGAGTAACCACTCTGTACCAGTTTGCAATCCCACCAGCAATGGAGGAGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACCACTCTGTACCAGTTTGCAATCCCACCAGCAATGGAGGAGTG  979

seq1  TACTTTTTTCTTGACATCCTTGACAGCTTGTGTTGTCACTTGAGTTTTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTTTCTTGACATCCTTGACAGCTTGTGTTGTCACTTGAGTTTTTG  1029

seq1  ATCTCAGCCATCCTGATTGGAGTAAGGTGGACTCTCAGGATTGTTTTGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGCCATCCTGATTGGAGTAAGGTGGACTCTCAGGATTGTTTTGAT  1079

seq1  TTGCATTTCTCAGATGATTGAGGACTTTGAACATCTCTTTAAGTACTTCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCTCAGATGATTGAGGACTTTGAACATCTCTTTAAGTACTTCT  1129

seq1  CTGCCATTCAAGATTCCTCTGTTGTGAATTC  1179
      |||||||||||||||||||||||||||||||
seq2  CTGCCATTCAAGATTCCTCTGTTGTGAATTC  1160

seq1: chr10_81741261_81742425
seq2: B6Ng01-347B14.g_66_1219

seq1  GAATTCTTTACTATCAAGAGAGGACTTAGAAATTTCCATCTTCTGTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTATCAAGAGAGGACTTAGAAATTTCCATCTTCTGTCTCA  50

seq1  TGAATAAGCGTGAGCCTGGGGGAAATGAATAGTTTACAAGATTAGCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGCGTGAGCCTGGGGGAAATGAATAGTTTACAAGATTAGCAGGA  100

seq1  TTAACATGCTAGATTAAGTCAAGACTGTTAAGAGTCTCGCCTGGGCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGCTAGATTAAGTCAAGACTGTTAAGAGTCTCGCCTGGGCTACT  150

seq1  ACCTTTAGTTTTTAAAAGACTGAACAAAAAGCAATTCTCACGTATGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAGTTTTTAAAAGACTGAACAAAAAGCAATTCTCACGTATGTTGT  200

seq1  ATAATCTATCAACCCAAGGCAGTTCTATGTATTAAAAATGATACTAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTATCAACCCAAGGCAGTTCTATGTATTAAAAATGATACTAAATG  250

seq1  ATATTATAACAATATGTGCTCTATTATGATGGAATGCTTAACATTAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATAACAATATGTGCTCTATTATGATGGAATGCTTAACATTAGTGA  300

seq1  CTTTTTAAATTTTAATTTTATTTGTAATTCATTTTTTACACCCCATATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAATTTTAATTTTATTTGTAATTCATTTTTTACACCCCATATTC  350

seq1  CATTCCCTGCCTCTCCCCTCCCACCCTTCAAATGCTTCACATCCCACACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTGCCTCTCCCCTCCCACCCTTCAAATGCTTCACATCCCACACC  400

seq1  TCCTCCCCATTACGCCCAGTCTCCACACGGACAGCCCTACCCTCCACCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCATTACGCCCAGTCTCCACACGGACAGCCCTACCCTCCACCCC  450

seq1  ATCTGACCTCTAAACTCCCTGGGGCCTCCAGTCTCTCGAGAGTTAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACCTCTAAACTCCCTGGGGCCTCCAGTCTCTCGAGAGTTAGAGAG  500

seq1  TTAGACCTGTAAGTCCTCTACTGTATGTGTGTTGGAGGCCTCATATCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACCTGTAAGTCCTCTACTGTATGTGTGTTGGAGGCCTCATATCAGC  550

seq1  TGGTGTATGCTGTCTGTTTGGTGGTCCAGTGTTTGAAAAATCTCGGGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATGCTGTCTGTTTGGTGGTCCAGTGTTTGAAAAATCTCGGGGGT  600

seq1  TCAGATTAATTAAGATTGCTGGTCCTCCTATAGGAAAGTGATTGGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAATTAAGATTGCTGGTCCTCCTATAGGAAAGTGATTGGTGACT  650

seq1  TTATAATTAATCACTGGTATAGCAAATCTCAGCTTCTAATCACAGATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTAATCACTGGTATAGCAAATCTCAGCTTCTAATCACAGATGAA  700

seq1  AAGGTTAGCCTATTTTCAACTCTTTTTGGATTAAGAATTTTTTAATGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGCCTATTTTCAACTCTTTTTGGATTAAGAATTTTTTAATGACT  750

seq1  TATTTTATGTATATGAACATACTGTTGTATCTTCAGACACACCAGAAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATGTATATGAACATACTGTTGTATCTTCAGACACACCAGAAGGG  800

seq1  GCATTGAATCCCATTATAGATTGTTCTGAGCCACCATGTGTCTGCTGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGAATCCCATTATAGATTGTTCTGAGCCACCATGTGTCTGCTGGTA  850

seq1  ATTGAACTCAGGACCTCTGGAAGAGTAATCAATGCTCTTAACCACTGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACTCAGGACCTCTGGAAGAGTAATCAATGCTCTTAACCACTGCAC  900

seq1  CATCTCTCCAGCCTGGATTAAGAATTTTTAAGAACCTCTAGCCCAGTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCCAGCCTGGATTAAGAATTTTTAAGAACCTCTAGCCCAGTGGT  950

seq1  TCTAAATGTGTTTGTTCTAAGACCAGTGAAAAACACTGATATTTACATTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATGTGTTTGTTCTAAGACCAGTGAAAAACACTGATATTTACATTA  1000

seq1  TTGTTCATAACAGTAGCAAAATTAGTTATGCAGAAGCAAAGCCAATAATT  1050
      |||||||| |||||||| ||||||| ||||||||||| |||||||| |||
seq2  TTGTTCAT-ACAGTAGC-AAATTAG-TATGCAGAAGC-AAGCCAAT-ATT  1045

seq1  GTGTGGTTGGAGGTGACCACAACATGAGGGTCTATCTGTATTACAGGGTC  1100
      |||  | ||||||||||||| ||||| | ||||||||||| |||| ||||
seq2  GTGGTGGTGGAGGTGACCAC-ACATG-GAGTCTATCTGTA-TACA-GGTC  1091

seq1  ACAGCATTGGGAAAGCTGAGAATCG-CTGCTCTGTAGCCTATTCTTCTAA  1149
      |||||||   | |||||||||  || ||||||||||||   |||||||||
seq2  ACAGCAT---GGAAGCTGAGATCCGCCTGCTCTGTAGCTATTTCTTCTAA  1138

seq1  G-TACAAATATGTAGAT  1165
      | |||| || |||||||
seq2  GTTACATAT-TGTAGAT  1154