BAC Information

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BAC

Clone NameB6Ng01-347E03
Chromosome10 (Build37)
Map Location 3,462,785 - 3,463,979
singlet/doubletsinglet
Overlap geneOprm1
Upstream geneCnksr3, A130090K04Rik
Downstream geneLOC237252, LOC100041224, Rgs17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347E03.bB6Ng01-347E03.g
ACCGA128915GA128916
length1,172787
definitionB6Ng01-347E03.b B6Ng01-347E03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagcccatggtcagctcaaggactgcctaggactggtgaggaa
tgtaacttagctatatgtcaaaatcaatccttagaggcacttataataaa
gcaatattaagggaaagcacacagatctgtttaccgactaaagcaagaac
attggatcattcgttatacaggatgccatggttccaggagactaagtttc
cgtgaactttccacctcaggaccgcatccaggcttttcggcctgtcaggc
aggtcactactggagtggatgtagcagtcaaagtgtttgataaccctttt
tagattttttaaaacactaagcctacagtatggaatgtgcctggttccca
taggcagatacacactgtatgtttcatttccttaccatcccgtgggtgct
tatcctaagcatattgtatggactaccatgtgtggaccagtcacaatgta
agcctttgaacagttgtactgacttaggcacagtaagaaggaagaactca
tccacaggtgagtttctacatgtcctacatgtcacttataaccaggctaa
aacactgccaagataaataatataccttgttggaactcacgtgcttttgt
tcttttgttacatgcagacaaggctttgcagctgtagtagttttcagcct
cagctagcatgtacattcttggggacatgcatggtagcctctacctctgc
tgccgaggcttctctctgttcatgatcataatgcacaatccccaaggcag
tcgtctccttctgagcccttgagtgctcagtgcttctccagaaatgcaca
ccatcttatggatagtaaaatgtaaacacagggattaggtccttatatat
ggctatgctgccagagcttcatcctcaggtgtctccctgtagaactccat
gtcccttgggccatgctttctccacacagaatggatggtcagttgtggta
cataaggcatgccttccccaggctgggagcttttcttctaccactgactt
acaaagtcacccataggtaaggctatagacatactcatccatcatatagt
gaccaccattaacaattagcttagcatttttgttcctctgcaacaatgag
aaatgcccatgagatgcatgtggcgactaaaggtgaggtgctgatgactg
acagaaatgtgggtcactttca

gaattctttgataaaggtttttgctgtttttttgtttggttttggttttt
gcttatttgttttgaggcagggtctcactttgtagcattggctttcctgg
aatttactatggagaccaggctagctttgaagtcatggaattgccttcct
tgcctcctgagtaagtgttgggattaaaattcaaggctttcagcactaca
cctggctatggctgttcttttaagttctgtgtcctggggtttgtctaggt
aattgtcattggcaaacacttttacagaactggctctttttggagagaag
atactggattgattatttttcctcatattgttgcgatgtttcatgctttt
gcaatgagattcgagtgtgtggatttcttttcttctaagtctgatatgga
tagaacagattggacagaaagagagggcctggatggagaagggtgtggga
gatttggttacgtggagaggttagatgtggtaaaaaacagccctcattct
atttaaatttttacctcacccctgtcctaccatggagcgggtctgcgggc
tgatctgtacgcgcacgagcatatgtttccccgagagtgcctcaggggcc
tttcagccctttcctgtcattgtcatggaggagaccatgtgagattgacg
aaactataggagcatctaacttctgaatggatccacccctaggtaaactc
gcttcttagtgggcaatcaaggttaaattcatggatcatcctgtcttcaa
ggttgatgcatagattatatcaaaatttaaaccgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_3462785_3463979
seq2: B6Ng01-347E03.b_48_1219 (reverse)

seq1  TGAAAAGGTGACCCCAACATCTCTGTCAATTTCCACTCCAGCACACTCAC  50
      |||||  |||||||  |||| ||||||| |     |  |||||| |||||
seq2  TGAAA--GTGACCC--ACATTTCTGTCAGT-----CATCAGCAC-CTCAC  40

seq1  CTCTAAGTCGGCCCACATGCATCTCATGGGGCCATTTCTCATTGTTTGGC  100
      || | |||||  ||||||||||||||||||  ||||||||||||||  ||
seq2  CT-TTAGTCG--CCACATGCATCTCATGGG--CATTTCTCATTGTT--GC  83

seq1  AGAGG-ACAAAAATGCTTAAGCTTAATTTGTTAATGGTTGGTTCACTATA  149
      ||||| |||||||||| ||||||  | |||||||||||  | ||||||||
seq2  AGAGGAACAAAAATGC-TAAGCT--AATTGTTAATGGT--GGTCACTATA  128

seq1  TGATGGATGAGTATTGTCTTATAGCCTTACCTATGGGTGACTTTGTAAGT  199
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TGATGGATGAGTA-TGTC-TATAGCCTTACCTATGGGTGACTTTGTAAGT  176

seq1  CAGTGGTAGAAGAAAAGCTCCCAGCCTGGGGAAGGCATGCCTTATGTACC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAGAAGAAAAGCTCCCAGCCTGGGGAAGGCATGCCTTATGTACC  226

seq1  ACAACTGACCATCCATTCTGTGTGGAGAAAGCATGGCCCAAGGGACATGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGACCATCCATTCTGTGTGGAGAAAGCATGGCCCAAGGGACATGG  276

seq1  AGTTCTACAGGGAGACACCTGAGGATGAAGCTCTGGCAGCATAGCCATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACAGGGAGACACCTGAGGATGAAGCTCTGGCAGCATAGCCATAT  326

seq1  ATAAGGACCTAATCCCTGTGTTTACATTTTACTATCCATAAGATGGTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGACCTAATCCCTGTGTTTACATTTTACTATCCATAAGATGGTGTG  376

seq1  CATTTCTGGAGAAGCACTGAGCACTCAAGGGCTCAGAAGGAGACGACTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGGAGAAGCACTGAGCACTCAAGGGCTCAGAAGGAGACGACTGC  426

seq1  CTTGGGGATTGTGCATTATGATCATGAACAGAGAGAAGCCTCGGCAGCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGATTGTGCATTATGATCATGAACAGAGAGAAGCCTCGGCAGCAG  476

seq1  AGGTAGAGGCTACCATGCATGTCCCCAAGAATGTACATGCTAGCTGAGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAGGCTACCATGCATGTCCCCAAGAATGTACATGCTAGCTGAGGC  526

seq1  TGAAAACTACTACAGCTGCAAAGCCTTGTCTGCATGTAACAAAAGAACAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTACTACAGCTGCAAAGCCTTGTCTGCATGTAACAAAAGAACAA  576

seq1  AAGCACGTGAGTTCCAACAAGGTATATTATTTATCTTGGCAGTGTTTTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACGTGAGTTCCAACAAGGTATATTATTTATCTTGGCAGTGTTTTAG  626

seq1  CCTGGTTATAAGTGACATGTAGGACATGTAGAAACTCACCTGTGGATGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTATAAGTGACATGTAGGACATGTAGAAACTCACCTGTGGATGAG  676

seq1  TTCTTCCTTCTTACTGTGCCTAAGTCAGTACAACTGTTCAAAGGCTTACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTTCTTACTGTGCCTAAGTCAGTACAACTGTTCAAAGGCTTACA  726

seq1  TTGTGACTGGTCCACACATGGTAGTCCATACAATATGCTTAGGATAAGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTGGTCCACACATGGTAGTCCATACAATATGCTTAGGATAAGCA  776

seq1  CCCACGGGATGGTAAGGAAATGAAACATACAGTGTGTATCTGCCTATGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGGGATGGTAAGGAAATGAAACATACAGTGTGTATCTGCCTATGGG  826

seq1  AACCAGGCACATTCCATACTGTAGGCTTAGTGTTTTAAAAAATCTAAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGCACATTCCATACTGTAGGCTTAGTGTTTTAAAAAATCTAAAAA  876

seq1  GGGTTATCAAACACTTTGACTGCTACATCCACTCCAGTAGTGACCTGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTATCAAACACTTTGACTGCTACATCCACTCCAGTAGTGACCTGCCT  926

seq1  GACAGGCCGAAAAGCCTGGATGCGGTCCTGAGGTGGAAAGTTCACGGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCGAAAAGCCTGGATGCGGTCCTGAGGTGGAAAGTTCACGGAAA  976

seq1  CTTAGTCTCCTGGAACCATGGCATCCTGTATAACGAATGATCCAATGTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCTCCTGGAACCATGGCATCCTGTATAACGAATGATCCAATGTTC  1026

seq1  TTGCTTTAGTCGGTAAACAGATCTGTGTGCTTTCCCTTAATATTGCTTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTAGTCGGTAAACAGATCTGTGTGCTTTCCCTTAATATTGCTTTA  1076

seq1  TTATAAGTGCCTCTAAGGATTGATTTTGACATATAGCTAAGTTACATTCC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTGCCTCTAAGGATTGATTTTGACATATAGCTAAGTTACATTCC  1126

seq1  TCACCAGTCCTAGGCAGTCCTTGAGCTGACCATGGGCTTTGAATTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTCCTAGGCAGTCCTTGAGCTGACCATGGGCTTTGAATTC  1172


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