Query= MSMg01no045_f05.b1 MSMg01no045_f05.b1 CHROMAT_FILE:
MSMg01no045_f05.b1 PHD_FILE: MSMg01no045_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:15 2005
(562 letters)
>mm_chr10_76975066_76976027
Length = 962
Score = 783 bits (405), Expect = 0.0
Identities = 411/413 (99%)
Strand = Plus / Minus
Query: 150 cctcctcctcctcttcttcttcctttttaagatttattttatatgtgtgagtacattgtc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 cctcctcctcctcttcttcttcctttttaagatttattttatatgtgtgagtacattgtc 903
Query: 210 attgtcttcagacacaccagaagagggcatcagaccccattacagatggttgtgagccac 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 attgtcttcagacacaccagaagagggcatcagaccccattacagatggttgtgagccac 843
Query: 270 catgtggtttctgggaattgaactcaggacctctggaagagcagtcagtgctcttaactg 329
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 842 catgtggtttctgggaattgaactcagcacctctggaagagcagtcagtgctcttaactg 783
Query: 330 ctaagccatctctccagcccaccattggcattcttaactgtcagtcttggtgtatataaa 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ctaagccatctctccagcccaccattggcattcttaactgtcagtcttggtgtatataaa 723
Query: 390 atggtgacagactcacctcatagagactgaggttaccttatccagaaaggtccaggcatt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atggtgacagactcacctcatagagactgaggttaccttatccagaaaggtccaggcatt 663
Query: 450 cagcaaattctggttccttgctccttattcgtgaggtgggctcagcaagatgaccaggcc 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagcaaattctggttccttgctccttattcgtgaggtgggctcagcaagatgaccaggcc 603
Query: 510 agacatctgcagaggggttagcatatccttctttgggacagcaagatgttggt 562
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 602 agacatctgcagaggggtttgcatatccttctttgggacagcaagatgttggt 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_f05.g1 MSMg01no045_f05.g1 CHROMAT_FILE:
MSMg01no045_f05.g1 PHD_FILE: MSMg01no045_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:15 2005
(615 letters)
>mm_chr10_76831939_76832956
Length = 1018
Score = 1087 bits (562), Expect = 0.0
Identities = 595/616 (96%), Gaps = 17/616 (2%)
Strand = Plus / Plus
Query: 1 ttcttgtgtcgagtatcacactgttgtatggagacaagtacaacaaaaccacccagccat 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ttcttgtgtcgagtatcacactgttgtatggagacaagtacgacaaaaccacccagccat 260
Query: 61 tttccagtttatggtgtgtactcacacatgtcttacatataagccactgataagcccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttccagtttatggtgtgtactcacacatgtcttacatataagccactgataagcccaat 320
Query: 121 agaactggctccatccagtttcttcctaatccctcaactatactgagatgtttccatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaactggctccatccagtttcttcctaatccctcaactatactgagatgtttccatgga 380
Query: 181 gagcaagaacaacccccagtaaggggctgaagcacggagccacacccttttaagagtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcaagaacaacccccagtaaggggctgaagcacggagccacacccttttaagagtgac 440
Query: 241 tgatccaaaaggcttttgattcagtcgaccacgaggtttccattcctttgccgttcgggc 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatccaaaaggcttttgattcagtagaccacgaggtttccattcctttgccgttcgggc 500
Query: 301 cacctgatggtcacggtgtcataa-gggtcttttacagcattaagggaaccacagaagga 359
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 501 cacctgatggtcacggtgtcagaaagggtcttttacagcattaagggaaccacagaagga 560
Query: 360 ctgacaatggccacagaacctcagtgacaataagaaagcttgctgaaggactgaaagcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgacaatggccacagaacctcagtgacaataagaaagcttgctgaaggactgaaagcag 620
Query: 420 gagcagatggaagcagggtgacctgacagggaaaagacctgacagtggaaagagaccact 479
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gagcagatggaagcagggtgacctgacag----------------tggaaagagaccact 664
Query: 480 gagggaaaggagtctttacacaagcagtcagccagccatgaagcagtgctcccaggcctc 539
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 665 gagggaaaggagtctttacacaagcagtcagccagccatgaggcagtgctcccaggcctc 724
Query: 540 cacggaaactaagaattagaaagtctgaggattcccagggtggatataaccactgacacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cacggaaactaagaattagaaagtctgaggattcccagggtggatataaccactgacacc 784
Query: 600 agggtgtaaaagagaa 615
||||||||||||||||
Sbjct: 785 agggtgtaaaagagaa 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1018
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1008
Effective search space: 609840
Effective search space used: 609840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
