Query= MSMg01no046_o07.b1 MSMg01no046_o07.b1 CHROMAT_FILE:
MSMg01no046_o07.b1 PHD_FILE: MSMg01no046_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:09 2005
(507 letters)
>mm_chr10_17422495_17423401
Length = 907
Score = 922 bits (477), Expect = 0.0
Identities = 495/501 (98%)
Strand = Plus / Minus
Query: 7 ggaattcaccattattacgaatgagcccatgctcatcagtgaaggaaaacgtccttcatt 66
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 707 ggaattcaccattattacgaatgagcccatgctcatcagtgaaggaaaacttccttcatt 648
Query: 67 agcttcctggcttgtcagaaacttctgcgggttcatttgtcttcctgatgttttataaaa 126
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 647 agcttcctggcttgtcagaaacttctgcgggttcatttgttttcctgatgttttataaaa 588
Query: 127 tgcatagtctataaacatagatataaccttttgggtagtaatctcatcaaagctgcggta 186
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgtatagtctataaacatagatataaccttttgggtagtaatctcatcaaagctgcggta 528
Query: 187 ttcctcattcccctatactggattgatatatgtcgcccaggattgtaagtgttctcctgt 246
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 527 ttcctcattcccctatactggattgatatatgtcgcccaggatcgtaagtgttctcctgt 468
Query: 247 gtcttgccttctatatggtaggactatacttttcttcagttttgaactgagagataagat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtcttgccttctatatggtaggactatacttttcttcagttttgaactgagagataagat 408
Query: 307 agtcacaaagcttcagagaagacagtgctcaaatgttcagagccacagtgctgaatcgca 366
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 407 agtcacaaagcttcagagaagacagtgctcaaatgttcagagccacagtgttgaatcgca 348
Query: 367 tcggaatcacaagccatcatttatctccttgtgcaattcaccctccatccacaggctgaa 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcggaatcacaagccatcatttatctccttgtgcaattcaccctccatccacaggctgaa 288
Query: 427 ggtatcagttaaaaaaagaagggggggttgggtttcaagaattaattcatgattagaaat 486
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 287 ggtatcagttaaaaaaagaagggggggttgggttccaagaattaattcatgattagaaat 228
Query: 487 cttggctagagagatggctaa 507
|||||||||||||||||||||
Sbjct: 227 cttggctagagagatggctaa 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_o07.g1 MSMg01no046_o07.g1 CHROMAT_FILE:
MSMg01no046_o07.g1 PHD_FILE: MSMg01no046_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:09 2005
(466 letters)
>mm_chr10_17266245_17267109
Length = 865
Score = 847 bits (438), Expect = 0.0
Identities = 459/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 tctgccttctttgtccattccctatggttctgaattgtgaacactgtgacccatttcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgccttctttgtccattccctatggttctgaattgtgaacactgtgacccatttcctg 260
Query: 61 aatgatctagctcaggaaatgtgagtttggaaataggagaaaggccaagtaggtggtaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgatctagctcaggaaatgtgagtttggaaataggagaaaggccaagtaggtggtaat 320
Query: 121 tttttttagtaagaagacactcagagagttttcccatagatggagtcaacagccttgagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttttagtaagaagacactcagagagttttcccatagatggagtcaacagccttgagt 380
Query: 181 ggcatggaacaaattggtggccacacaaacatgttgcaatgctcatttgaatagcaagag 240
|||||||||||||||||||||||||||| |||||||||| |||| | |||||||||||||
Sbjct: 381 ggcatggaacaaattggtggccacacaagcatgttgcaacgctcgtctgaatagcaagag 440
Query: 241 aacataatgcttcgataattggaaggcaaaacatctaatcagaggggtgaacttttaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacataatgcttcgataattggaaggcaaaacatctaatcagaggggtgaacttttaaaa 500
Query: 301 aagtggcccgcacttctggggaactgtctctgtggagtgcatcagccccccggaaagcca 360
| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 a-gtggcctgcacttctggggaactgtctctgtggagtgcatcagccccccagaaagcca 559
Query: 361 tcttgaggggactggaaacttgagctctttggccagctgggactttccagagagaaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttgaggggactggaaacttgagctctttggccagctgggactttccagagagaaccca 619
Query: 421 gactgatgaatctagtcgtacccagacaggtctctgcatatctgtt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gactgatgaatctagtcgtacccagacaggtctctgcatatctgtt 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
