Query= MSMg01no051_e13.b1 MSMg01no051_e13.b1 CHROMAT_FILE:
MSMg01no051_e13.b1 PHD_FILE: MSMg01no051_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:45 2005
(521 letters)
>mm_chr10_102570274_102571194
Length = 921
Score = 930 bits (481), Expect = 0.0
Identities = 511/521 (98%)
Strand = Plus / Plus
Query: 1 gtgtttcatcacagcaatagtaactaagaccctggttctggtttgctcctattttatttt 60
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 201 gtgtttcatcacagcaatagtaactaagacactggttctggtttgcttttattttatttt 260
Query: 61 actttacccattattttagatccttattttattttctctgagaaggaggaaatggagcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actttacccattattttagatccttattttattttctctgagaaggaggaaatggagcgg 320
Query: 121 tagatttgggtagacaggcatgtggggaggatctgaaggaggaaaaactattatcaggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagatttgggtagacaggcatgtggggaggatctgaaggaggaaaaactattatcaggac 380
Query: 181 atattgtatggaaaaatctatttcaattcaaaacataaaaattaatttacaacatgaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atattgtatggaaaaatctatttcaattcaaaacataaaaattaatttacaacatgaaaa 440
Query: 241 gaatgcttatattatcatcgttgtttatatagaaatattttctttagcaacagataatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgcttatattatcatcgttgtttatatagaaatattttctttagcaacagataatat 500
Query: 301 aattatccaaagctaccatctttatatagtctgggggtggagagatggttaagctgttaa 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattatccaaagctaccatcaatatatagtctgggggtggagagatggttaagctgttaa 560
Query: 361 gagcaccgactactcttccagaagtcctgagttcacttctcagcaaccacaaggtggctc 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 gagcaccgactactcttccagaagtcctgagttcaattctcagcaaccacaaggtggctc 620
Query: 421 acaaccatcagcaatggaatctgatgccacctagtggtgtatctgaccacagctacagtg 480
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 acaaccatcagtaatggaatctgatgccatctagtggtgtatctgaccacagctacagtg 680
Query: 481 tcttcatattcttaaatacatacttctttacagaaagaatc 521
|||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 681 tcttcatattcttaaatacataattctttaaagaaagaatc 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no051_e13.g1 MSMg01no051_e13.g1 CHROMAT_FILE:
MSMg01no051_e13.g1 PHD_FILE: MSMg01no051_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:50:45 2005
(331 letters)
>mm_chr10_102578415_102579144
Length = 730
Score = 582 bits (301), Expect = e-171
Identities = 319/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 6 tcagtacatagagtgaattaattttctttcattcttacgattctagaattttaacacatc 65
||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||
Sbjct: 529 tcagtacatagagtgaattaattttcttttattcttatgattttagaattttaaaacatc 470
Query: 66 ttaaagatatttattagtatgagaaataatcactgagaattgcctaagaatatctgctgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ttaaagatatttattagtatgagaaataatcactgagaattgcctaagaatatctgctgt 410
Query: 126 gtttcttataactgtgactataagctttgtatgagaatatttctctttaatggaaaagat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gtttcttataactgtgactataagctttgtatgagaatatttctctttaatggaaaagat 350
Query: 186 tatgtgaaatactctttggatatatattaaatggatttctatgataagtttttaaactta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tatgtgaaatactctttggatatatattaaatggatttctatgataagtttttaaactta 290
Query: 246 attttaagaaattttaaaaaacaaagctatatttaatatttggatagaatttttatcata 305
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 attttaagaaattt-aaaaaacaaagctatatttaatatttggatagaatttttatcata 231
Query: 306 acccaaatgctaaatccaagtttca 330
| |||||||||||||||||||||||
Sbjct: 230 agccaaatgctaaatccaagtttca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 730
Length adjustment: 9
Effective length of query: 322
Effective length of database: 721
Effective search space: 232162
Effective search space used: 232162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
