Query= MSMg01no058_m23.b1 MSMg01no058_m23.b1 CHROMAT_FILE:
MSMg01no058_m23.b1 PHD_FILE: MSMg01no058_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:09 2005
(507 letters)
>mm_chr10_123721056_123721958
Length = 903
Score = 748 bits (387), Expect = 0.0
Identities = 432/449 (96%), Gaps = 4/449 (0%)
Strand = Plus / Minus
Query: 1 aattggctaattgaatctcttgtggtcacctcaagaatttaaatccagacatagacagaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 aattggctaattgaatctcttgtggtcatctcaagaatttaaatccagacatagacagaa 386
Query: 61 tcgtgaatttaaaatgaacaaaattaggatcaaattgcactacgttttaagttaaggtct 120
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 385 tcgtgaatttaaaatgaacaaaattaggatcaaattgcacaatgttttaagttaaggtct 326
Query: 121 ctattttttaatttatttgggttagtaggaaacaattttgatcaactagagaatgttttt 180
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 325 ctgttttttaatttatttgggtcagtaggaaacaattttgatcaactagagaatgatttt 266
Query: 181 ttttcttaagataaattgcacatgtgaagtctttaacacaggaattttatgttttcactg 240
| |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||
Sbjct: 265 t----ttaagataaattgcacatgtaaagtccttaacacaggaactttatgttttcactg 210
Query: 241 cagctaaaaagtataatttttgctatggaaggccatgtaaaggcttattagaaaattaaa 300
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 209 cagctaaaaagtaaaatttttgctatggaaggccatgtaaaggtttattagaaaattaaa 150
Query: 301 aacataactaccatatgatactcttatatcactactgtatggaaaaccaaagcacttcat 360
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 149 aacataactaccatatgatactcttgtatcactactgtatggaaaactaaagcacttcat 90
Query: 361 atcttcctaaggagaaatatagatatccacgctcatttttgctctattcacagcagctaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 atcttcctaaggagaaatatagatatccacgctcatttttgctctattcacagcagctaa 30
Query: 421 gaaatgccatctgcctagatatccaacat 449
|||||||||||||||||||||||||||||
Sbjct: 29 gaaatgccatctgcctagatatccaacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 903
Length adjustment: 10
Effective length of query: 497
Effective length of database: 893
Effective search space: 443821
Effective search space used: 443821
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_m23.g1 MSMg01no058_m23.g1 CHROMAT_FILE:
MSMg01no058_m23.g1 PHD_FILE: MSMg01no058_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:09 2005
(221 letters)
>mm_chr10_123572936_123573556
Length = 621
Score = 404 bits (209), Expect = e-117
Identities = 218/221 (98%)
Strand = Plus / Plus
Query: 1 tgctgtaaaattaagtctcctaaatattacagggaagccactacacctataacatttaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tgctgtaaaattaagtctcctaaatattacagggaagccactacacctataaaatttaaa 260
Query: 61 caacatggtttcccaaataagtctcataaaattttagtgctgtatactgtaggtgttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacatggtttcccaaataagtctcataaaattttagtgctgtatactgtaggtgttgtt 320
Query: 121 catataactatgctcgtgcatctgtctgtacacatagtgacacatgctacttcttcacaa 180
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 321 catataactatgctcgtgcatctgtctgtacacacagtgaaacatgctacttcttcacaa 380
Query: 181 tcaaagaactataatttttagggcaatgtctccccactaga 221
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaaagaactataatttttagggcaatgtctccccactaga 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
