XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAAT
TCTTTGCTATTTACCTATTGAAAGTTCATGTCTTGAATTTTCAAAGACAA
GAAAAAAAATCAAAGCTAACTAGGCATTTGTATCCTGTCAATACAGCATC
TTATAAGATTTGTGGACTTTTAATTATTTCTATGATTATTTTAGAATAGT
TGTGACATTTTCTTGGGAAATTTTGGCCCTTTGTCAGCTAATCTTTACAT
TGCTGCTTCAGGTTTCCCATCCATTTCATCAATGTTCCATTAAGAGAACA
TTTTAGGGGCTGAGGAGGTGGCTCAGCATGTAAGAGCGCTTATATAGGCA
AGAAGACCCCAATCCATGTGAAAAGCCATGTGTGCCTCTAGCCTAGGAGG
ATCAGTCAAGGTCACTGGATTCCTCTCTCAAAACAATAAAATGGAGGTTG
ATAGAACAGGACATCCAGTGCCCTCCTCTGACCTGTATCCCTGTGCACAT
ATAACACACATACACACACTGTACACATACAGACATGCACATACATACAC
CATACACGAGCACAGGCATGCATACACATATACACACCATACATGTATGC
ACACACACAAACATGCACATACATACACCATACATGAGTACATGCATGCA
CACACATATACACACCATACGTGTGTGCACACACACAGACATGCACATAC
ATACACCATACATGTACACATGCATGCACACACACAGN

ATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXACTACATTGCCAAGAAGGATCTTGAAATCT
GCATTCTCTTGCCATTACTTTGCAAGTGCTAGGATTACAGGCACATGTAA
CCACATCTGCTTTTATGTGATGATGTGGCTTGAATCTAGGGCTTCATGCA
TGTTAGGTACACATTATATCCACTGAGGTACAGCTATTGAGCAATGCTGA
GAGTTTCCAATGAAGGTATTATTAAGCTTTGACTGTTTAGAGCTACCTAC
AGCATGCAAGTTTATGGTGACATTATTGCATAGTAGCTAAGATATGAAAG
CAATCCACATTCCCATCAACAGATAAACAGATAAAGAAAATGTATCCTAT
ATGCACAAGAAGCATAAAATGATGTCATCTGCAGGGAAATGGTTTGTACT
AAAAATCATCATGCTAAGTGATAGCCAGAGCCAGAAAGGTAAATAACACA
ATTTTTCTTTCTTTTTTTTTTTTTTTTAGATTTATTTATTTATTATTATA
TGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGAT
CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGCATTTGAACTT
TGGACCTTCAGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCAC
CAGCCCCCTAACACAATTTTTCTATATGCAGAN

Query= MSMg01no059_k18.b1 MSMg01no059_k18.b1 CHROMAT_FILE:
MSMg01no059_k18.b1 PHD_FILE: MSMg01no059_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:14 2005
         (695 letters)



>mm_chr10_6543898_6544994
          Length = 1097

 Score = 1189 bits (615), Expect = 0.0
 Identities = 651/667 (97%), Gaps = 10/667 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggaattctttgctatttac----ctattgaaagttcatgtcttgaattttcaaagacaag 58
           |||||||||||||||   |    |||||||||||||||||||||||||||||||||||||
Sbjct: 662 ggaattctttgctat---cagaactattgaaagttcatgtcttgaattttcaaagacaag 606

                                                                       
Query: 59  -aaaaaaaatcaaagctaactaggcatttgtatcctgtcaatacagcatcttataagatt 117
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aaaaaaaaatcaaagctaactaggcatttgtatcctgtcaatacagcatcttataagatt 546

                                                                       
Query: 118 tgtggacttttaattatttctatgattattttagaatagttgtgacattttcttgggaaa 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgtggacttttaattatttctatgattattttagaatagttgtgacattttcttgggaaa 486

                                                                       
Query: 178 ttttggccctttgtcagctaatctttacattgctgcttcaggtttcccatccatttcatc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttttggccctttgtcagctaatctttacattgctgcttcaggtttcccatccatttcatc 426

                                                                       
Query: 238 aatgttccattaagagaacattttaggggctgaggaggtggctcagcatgtaagagcgct 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 425 aatgttccattaagagaacattttaggggctgaggaggtggctcagcatgtaagagcact 366

                                                                       
Query: 298 tatataggcaagaagaccccaatccatgtgaaaagccatgtgtgcctctagcctaggagg 357
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tatacaggcaagaagaccccaatccatgtgaaaagccatgtgtgcctctagcctaggagg 306

                                                                       
Query: 358 atcagtcaaggtcactggattcctctctcaaaacaataaaatggaggttgatagaacagg 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atcagtcaaggtcactggattcctctctcaaaacaataaaatggaggttgatagaacagg 246

                                                                       
Query: 418 acatccagtgccctcctctgacctgtatccctgtgcacatataacacacatacacacact 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acatccagtgccctcctctgacctgtatccctgtgcacatataacacacatacacacact 186

                                                                       
Query: 478 gtacacatacagacatgcacatacatacaccatacacgagcacaggcatgcatacacata 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtacacatacagacatgcacatacatacaccatacacgagcacaggcatgcatacacata 126

                                                                       
Query: 538 tacacaccatacatgtatgcacacacacaaacatgcacatacatacaccatacatgagta 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tacacaccatacatgtatgcacacacacaaacatgcacatacatacaccatacatgagta 66

                                                                       
Query: 598 catgcatgcacacacatatacacaccatacgtgtgtgcacacacacagacatgcacatac 657
           ||||||||||||||||||| |||||||||| ||||||||||||||  | |||| ||||||
Sbjct: 65  catgcatgcacacacatatgcacaccatacatgtgtgcacacaca--ggcatgtacatac 8

                  
Query: 658 atacacc 664
           |||||||
Sbjct: 7   atacacc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1097
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1087
Effective search space:   744595
Effective search space used:   744595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)