Query= MSMg01no063_m15.b1 MSMg01no063_m15.b1 CHROMAT_FILE:
MSMg01no063_m15.b1 PHD_FILE: MSMg01no063_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:17 2005
(316 letters)
>mm_chr10_29789082_29789797
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%)
Strand = Plus / Minus
Query: 4 ggaattctgtagatttaagtgaggacattagctctattagactagtatatgataagatat 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 ggaattctgtagatttaagtgaggacattagctctattagactagtatacgataagatat 386
Query: 64 ccaaaactaagcctagaaaatagccaccgctacgtatgtatacattgtcctcaaatgaac 123
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaaactaagcctagaaaatagccactgctacgtatgtatacattgtcctcaaatgaac 326
Query: 124 catgtcaaaagatcattttaatttacaaataggaagtagtattgtgctccggggttctgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgtcaaaagatcattttaatttacaaataggaagtagtattgtgctccggggttctgc 266
Query: 184 tgagtttcttctgagccatttacattgctgatgtgctctgaaactagttagataagaacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgagtttcttctgagccatttacattgctgatgtgctctgaaactagttagataagaacc 206
Query: 244 cctgtgggaagtcacatgtgccgttgcagagtggcactgactactgctggccaccacaca 303
||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cctgtgggaagccacatgtgctgttgcagagtggcactgactactgctggccaccacaca 146
Query: 304 taagtttggacaa 316
|||||||||||||
Sbjct: 145 taagtttggacaa 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_m15.g1 MSMg01no063_m15.g1 CHROMAT_FILE:
MSMg01no063_m15.g1 PHD_FILE: MSMg01no063_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:18 2005
(287 letters)
>mm_chr10_29713047_29713734
Length = 688
Score = 462 bits (239), Expect = e-135
Identities = 271/287 (94%), Gaps = 11/287 (3%)
Strand = Plus / Plus
Query: 1 tgtagag-cactaatataaaattatgaaatggatagaattggaaaacattaaaacctgga 59
||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 209 tgtagagtcactaatataaaattatgaaatggatagaattggaaaacatt---------a 259
Query: 60 aaacaaaataatctggagtcataaatgatatttttt-tctcatttgtggattctataccc 118
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 260 aaacaaaataatctggagtcataaatgatattttttctctcatttgtggattctataccc 319
Query: 119 taaatgtcaaatatgtataaaagtgggaataattataagtaatgaccaggatctaaaagg 178
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taactgtcaaatatgtataaaagtgggaataattataagtaatgaccaggatctaaaagg 379
Query: 179 gggatacatgaatggaaaaaggaagattttaaaaaagaaaattttgaagagaataaaaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggatacatgaatggaaaaaggaagattttaaaaaagaaaattttgaagagaataaaaca 439
Query: 239 aagtataatgaagaattccaggggtgagaggtataacagggaaagta 285
||||| || |||||||| ||||||||| |||||||||||||||||||
Sbjct: 440 aagtagaaggaagaatttcaggggtgacaggtataacagggaaagta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
