Query= MSMg01no064_e07.b1 MSMg01no064_e07.b1 CHROMAT_FILE:
MSMg01no064_e07.b1 PHD_FILE: MSMg01no064_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:03 2005
(641 letters)
>mm_chr10_114062232_114063275
Length = 1044
Score = 924 bits (478), Expect = 0.0
Identities = 505/518 (97%), Gaps = 9/518 (1%)
Strand = Plus / Minus
Query: 127 tattcagttgtttggaaaataagcattgcttctgtttagtatcagagttgagcagtcaat 186
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1044 tattcagttgtttggaaaataagcattgtttctgtttagtatcagagttgagcagtcaat 985
Query: 187 ctacttcactttagtaaatgtagctaatatctaaataagctcataaaatagtgatcaagt 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 984 ctacttcactttagtaaatgtagctaatatctaaataagctcataaaatagtgatcgagt 925
Query: 247 aaaacctgtcttaagcccagataataataactaatttggttgactattttaaaattaaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 aaaacctgtcttaagcccagataataataactaatttggttgactattttaaaattaaaa 865
Query: 307 aaaaagtgctctgtactgaatcatgctataattaagaaatagtgtttcctatctcaaaaa 366
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 864 aaaaagtgctctgtactgaa------tataattaagaaatagtgtttcctatctcaaaaa 811
Query: 367 catttctgagtaagctaaatgctattataggttagtccagtgatttgaagcacaacatta 426
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 810 catttctgagtaagctaaatgctattataggttagcccagtgatttgaagcacaacatta 751
Query: 427 cagaaagcaatttggaaaggggg-aaaaaacagaaag--aaaaaaaaaggaaaaccaagt 483
||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||
Sbjct: 750 cagaaagcaatttggaaagggggaaaaaaacagaaagaaaaaaaaaaaggaaaacaaagt 691
Query: 484 gaaatcttgtttgcattaggaggtaatgggaatttcttttttgttctcatatatatagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gaaatcttgtttgcattaggaggtaatgggaatttcttttttgttctcatatatatagaa 631
Query: 544 gaggtaacaacacaacttaagctaaatgcaaatagaatgaatccattgcctttgggcaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaggtaacaacacaacttaagctaaatgcaaatagaatgaatccattgcctttgggcaga 571
Query: 604 aagtgcaagtgactgccttgtaatgtcactttacccca 641
||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aagtgcaagtgactgccttgtaatgtcactttacccca 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1044
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1034
Effective search space: 652454
Effective search space used: 652454
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_e07.g1 MSMg01no064_e07.g1 CHROMAT_FILE:
MSMg01no064_e07.g1 PHD_FILE: MSMg01no064_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:04 2005
(382 letters)
>mm_chr10_113921117_113921898
Length = 782
Score = 690 bits (357), Expect = 0.0
Identities = 375/381 (98%)
Strand = Plus / Plus
Query: 1 atttactaaggaggtcactcaccaaaacctcagctttgtctgtgacctgcttgtgtttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttactaaggaggtcactcaccaaaacctcagctttgtctgtgacctgcttgtgtttgt 260
Query: 61 tgaacacttgttctttgtccacctgttatcttcaaagaggccaaggattacctgacttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacacttgttctttgtccacctgttatcttcaaagaggccaaggattacctgacttac 320
Query: 121 tattgtgtttgaacgaaacttatataaacagaattttaaaatatgaaatatttatttgaa 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgtgtttgaaagaaacttatataaacagaattttaaaatatgaaatatttatttgaa 380
Query: 181 tacttaaataaaagcaacatttaggtccaagtagagagcacatttgcaggaataaatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacttaaataaaagcaacatttaggtccaagtagagagcacatttgcaggaataaatctt 440
Query: 241 attctctgcttatttactttcactctgttaatgaaacatttcttgaaataccaactgcaa 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 attctctgcttatttacttttactctgttaatgaaacatttcttgaaataccaactgaaa 500
Query: 301 atatgaattcaatgatattttagggatgtttcatcttttacagaaataatgactatatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatgaattcaatgatattttagggatgtttcatcttttacagaaataatgactatatac 560
Query: 361 ttcaaagttttaaagtcttca 381
|||||| ||||||||||||||
Sbjct: 561 ttcaaacttttaaagtcttca 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
