Query= MSMg01no064_h17.b1 MSMg01no064_h17.b1 CHROMAT_FILE:
MSMg01no064_h17.b1 PHD_FILE: MSMg01no064_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:26 2005
(422 letters)
>mm_chr10_118341204_118342027
Length = 824
Score = 745 bits (385), Expect = 0.0
Identities = 403/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Minus
Query: 16 gaattcc-tgtgaccttcc-cataatgtccttcacttactatggagtcacagtggcactg 73
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattccatgtgaccttccacataatgtccttcacttactatggagtcacagtggcactg 565
Query: 74 ttgatgaactcagagcccttgacaccgcctgaaccacatcatggaaaaatgactctgctt 133
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 564 ttgatgaactcagagcccttgacaatggctgaaccacatcatggaaaaatgactctgctt 505
Query: 134 acagattcacttatttactctatctgtcatatcaaagtgctgtgaactgagcctcagcag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acagattcacttatttactctatctgtcatatcaaagtgctgtgaactgagcctcagcag 445
Query: 194 cagaaacacctcatgggtctaagggctagaaacctaactgaaggtctggatgggttggct 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagaaacacctcatgggtctaagggctagaaacctaactgaaggtctggatgggttggct 385
Query: 254 cctgggagcaaggagaaaggatacacttcaggcttcccggcatctctctccgtttgtgtg 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctgggagcaaggagaaaggatacacttcaggcttcccggcatctctctccgtttgtgtg 325
Query: 314 gccttcctctgtgtgtaatctctctttattgccagtgtgaagttttacgaggaaaattat 373
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 gccttcctctgtgtgtaatctctctttattgccagtgtgaagttttacgaggaaaaatat 265
Query: 374 ctaataggattaaatgcctctccctgcccccttcaatacgatctctttt 422
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaataggattaaatgcctctccctgcccccttcaatacgatctctttt 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 824
Length adjustment: 9
Effective length of query: 413
Effective length of database: 815
Effective search space: 336595
Effective search space used: 336595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_h17.g1 MSMg01no064_h17.g1 CHROMAT_FILE:
MSMg01no064_h17.g1 PHD_FILE: MSMg01no064_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:26 2005
(287 letters)
>mm_chr10_118249416_118250101
Length = 686
Score = 480 bits (248), Expect = e-140
Identities = 275/284 (96%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 ctaaaaatagacacaggggctggagcacacagctggggctcccttcaggactttggcttc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 201 ctaaaaatagacacaggggctggagcacacagctgggactcccttcaggactttg-cttc 259
Query: 61 atcgggactagtggctaaaaagaaacaggctggaagcctctggaaaaattcagaagcttt 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 260 atcgggactagtggctaaaaagaaacagactggaagcctctggaaaaattcagaagcttt 319
Query: 121 ggttccggggagatgaaaataggcctttggggtgtgccgagaggaagggtcagtgcgaca 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 320 ggttccggggagatgaaaataggcctttggggtgtgccgagatgaagggtcagtgtgaca 379
Query: 181 tgccatgctcccaagagaacgtgcatctcgagagcatatatgtatatgtcatatgtacat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 tgccatgctcccaagagaacgtgcatctcgagagcatatatgtatatgccatatgtacat 439
Query: 241 atgtgtatacacatatatgtatatgcatatacacgtatatatga 284
||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 440 atgtgtatacacatatacgtatatgcatatacatttatatatga 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 686
Length adjustment: 9
Effective length of query: 278
Effective length of database: 677
Effective search space: 188206
Effective search space used: 188206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
