Query= MSMg01no064_k02.b1 MSMg01no064_k02.b1 CHROMAT_FILE:
MSMg01no064_k02.b1 PHD_FILE: MSMg01no064_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:42 2005
(423 letters)
>mm_chr10_25794168_25794993
Length = 826
Score = 717 bits (371), Expect = 0.0
Identities = 403/423 (95%), Gaps = 16/423 (3%)
Strand = Plus / Minus
Query: 17 gaattctgagtgccctgt-------------aaaaaaaaaaaaaaaaaggaaatggctac 63
|||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 657 gaattctgagtgccctgttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaaatggctac 598
Query: 64 a---aagtatgtagaggggaggacctttgggccaaggcaccgctggtaggatatataaga 120
| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 597 aaagaagtatgtagaggggaggacctttgggccaaggcactgttggtaggatatataaga 538
Query: 121 gcaagttattctttggaaactttataaccagaggggaaattacaaagaaaacccaggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gcaagttattctttggaaactttataaccagaggggaaattacaaagaaaacccaggaat 478
Query: 181 gtagcagagtcaaaagatgaggaatcttagatgccttcctgcagtaccatggctaagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gtagcagagtcaaaagatgaggaatcttagatgccttcctgcagtaccatggctaagcct 418
Query: 241 attctgatcatcatttgtgcagaggatgccaggtccctctgtattcatttctgtcagggt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 417 attctgatcatcatttgtgcagaggatgccaggtccctctgtattcacttctgtcagggt 358
Query: 301 ttctgttggttggtcaaggatgcatttaattatgtgtacatgagactggattagcaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttctgttggttggtcaaggatgcatttaattatgtgtacatgagactggattagcaataa 298
Query: 361 agggcttggtggctgatgtgaatagaaggtctttagagccacctttaggtagatctactt 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 297 agggcttggtggctgatgtgaatggaaggtctttagagccacctttaggtagatctactt 238
Query: 421 cag 423
|||
Sbjct: 237 cag 235
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 826
Length adjustment: 9
Effective length of query: 414
Effective length of database: 817
Effective search space: 338238
Effective search space used: 338238
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_k02.g1 MSMg01no064_k02.g1 CHROMAT_FILE:
MSMg01no064_k02.g1 PHD_FILE: MSMg01no064_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:42 2005
(259 letters)
>mm_chr10_25631832_25632490
Length = 659
Score = 501 bits (259), Expect = e-146
Identities = 259/259 (100%)
Strand = Plus / Plus
Query: 1 aatttttaataggtccaaagcttttcttagtcattcctatcttatgctgtttacatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttttaataggtccaaagcttttcttagtcattcctatcttatgctgtttacatcctt 260
Query: 61 ggctaacttgctgtcttttatgatagcattttaataattttttgtaatagagtataattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggctaacttgctgtcttttatgatagcattttaataattttttgtaatagagtataattt 320
Query: 121 tccatgtgccactattaatagaattcttggtacaataatgatttatacccatctcacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccatgtgccactattaatagaattcttggtacaataatgatttatacccatctcacctt 380
Query: 181 gggcacataagtcattcacacccactttgtttttaggcttatgataatttttgacatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcacataagtcattcacacccactttgtttttaggcttatgataatttttgacatcaa 440
Query: 241 gttttttaatttctaagtg 259
|||||||||||||||||||
Sbjct: 441 gttttttaatttctaagtg 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
