Query= MSMg01no065_l05.b1 MSMg01no065_l05.b1 CHROMAT_FILE:
MSMg01no065_l05.b1 PHD_FILE: MSMg01no065_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:17 2005
(346 letters)
>mm_chr10_17253553_17254297
Length = 745
Score = 615 bits (318), Expect = e-180
Identities = 336/342 (98%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 5 gaattcacatccagtagccgccagtcaataaccccaggctttctccaggtctaggggaaa 64
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatccaggagttgccagtcaataaccccaggctttctccaggtctaggggaaa 264
Query: 65 gggcctatcccacagcctgacccaccctatttcatgacctagagtcactctgaggtctct 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 gggcctatcccacagcctgacccaccctattccatgacctagagtcactctgaggtctct 324
Query: 125 caactctggctaagtttgtttgtatggtgtcctttcgtacatgtgctcacaacaagcaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caactctggctaagtttgtttgtatggtgtcctttcgtacatgtgctcacaacaagcaaa 384
Query: 185 acctgcctggctcccagacaaaaatgtcaccctaagaaaagttaaggttcccactcatga 244
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 acctgcctggctcccagacaaaaatgtcaccctaagaaaagt-aaggttcccactcatga 443
Query: 245 aaacaccattatagagatcaacccgtgaataatgcacacctctgcaccaccttaggcaac 304
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaacacctttatagagatcaacccgtgaataatgcacacctctgcaccaccttaggcaac 503
Query: 305 ataaaacagacctgagcctgaaggatcagaacttggtaacag 346
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ataaaacagacctgagcctgaaggatcagaacttggtaacag 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 745
Length adjustment: 9
Effective length of query: 337
Effective length of database: 736
Effective search space: 248032
Effective search space used: 248032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_l05.g1 MSMg01no065_l05.g1 CHROMAT_FILE:
MSMg01no065_l05.g1 PHD_FILE: MSMg01no065_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:17 2005
(224 letters)
>mm_chr10_17393857_17394480
Length = 624
Score = 433 bits (224), Expect = e-126
Identities = 224/224 (100%)
Strand = Plus / Minus
Query: 1 tccatgtgttccgattcagtgctgagtctgtgaaaagggcttcctttgtgcagtaggccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tccatgtgttccgattcagtgctgagtctgtgaaaagggcttcctttgtgcagtaggccc 365
Query: 61 ccagttggcatctgccaacagattccagatttgtcaccgtgaaaacccaaggttttggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ccagttggcatctgccaacagattccagatttgtcaccgtgaaaacccaaggttttggtt 305
Query: 121 ggtgcctaatgaaggtggttgctccttccagccaaggaccttgctggaggacttgccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggtgcctaatgaaggtggttgctccttccagccaaggaccttgctggaggacttgccagg 245
Query: 181 gaagtgtttgctcttcctggggatttgatgaacagttttgtgta 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaagtgtttgctcttcctggggatttgatgaacagttttgtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space: 132225
Effective search space used: 132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
