Query= MSMg01no068_l05.b1 MSMg01no068_l05.b1 CHROMAT_FILE:
MSMg01no068_l05.b1 PHD_FILE: MSMg01no068_l05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:13 2005
(548 letters)
>mm_chr10_89740226_89741173
Length = 948
Score = 1023 bits (529), Expect = 0.0
Identities = 544/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Minus
Query: 1 actctatagatc-cactggccttgaaatcagagaaccacctgtctctgccttcttagtgc 59
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 actctatagagcaaactggccttgaaatcagagaaccacctgtctctgccttcttagtgc 790
Query: 60 taggattaaaggtgagggcccccacactattttatgtaagtcttacaaacctactgagcc 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 789 taggattaaaggtgagggcccccacactattttatgtgagtcttacaaacctactgagcc 730
Query: 120 tggaggcccagaatctttgacagatgctgatgggacagatggatgagtgaatggttgtgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tggaggcccagaatctttgacagatgctgatgggacagatggatgagtgaatggttgtgt 670
Query: 180 ggaaagggaacattccaaagggcaagaacaaacgctgacaaagatctaggatgtacgtat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggaaagggaacattccaaagggcaagaacaaacgctgacaaagatctaggatgtacgtat 610
Query: 240 gcaaagtggcagatgacctttcagtgaatcttcattcctttcaacaagttactcgttatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcaaagtggcagatgacctttcagtgaatcttcattcctttcaacaagttactcgttatt 550
Query: 300 ttgcccaattgcactattacacatttttagaccaatgtgatgagctgagacatttgtaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttgcccaattgcactattacacatttttagaccaatgtgatgagctgagacatttgtaaa 490
Query: 360 tacattgctttcttaactgaggaaaactaaataatgaaatagttttaattctcgatttta 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacgttgctttcttaactgaggaaaactaaataatgaaatagttttaattctcgatttta 430
Query: 420 aaaaactatttaaggagaaaattaataccaaaaaactataattttatctttcccatattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaaaactatttaaggagaaaattaataccaaaaaactataattttatctttcccatattt 370
Query: 480 taaaaaattgcttcaggaccattaaaagaacaatctagtttgcatttctcaattttgtgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taaaaaattgcttcaggaccattaaaagaacaatctagtttgcatttctcaattttgtgt 310
Query: 540 attctaata 548
|||||||||
Sbjct: 309 attctaata 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_l05.g1 MSMg01no068_l05.g1 CHROMAT_FILE:
MSMg01no068_l05.g1 PHD_FILE: MSMg01no068_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:13 2005
(419 letters)
>mm_chr10_89596624_89597441
Length = 818
Score = 764 bits (395), Expect = 0.0
Identities = 413/419 (98%), Gaps = 1/419 (0%)
Strand = Plus / Plus
Query: 1 ctcgcatggtcagtcctagggtcagtgagccttcagcctcccttttatccttgtacagtc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctcgcatggtcagtcctagggtcagtgagccttcagcctcccttttatccttgtacggtc 260
Query: 61 tgtagtaatggatggcgacgtcgtccagttggactgcttctttgatgtacttcaggtagg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tgtagtaatggatggcgacgtcgtccagtcggactgcttctttgatgtacttcaggtagg 320
Query: 121 cctcggaggccgtcagggcaaactggtccttgtgcatgtttgggatgtgtttcaggatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcggaggccgtcagggcaaactggtccttgtgcatgtttgggatgtgtttcaggatgt 380
Query: 181 agtccttccccctcttggaaacaacccatgccggggaagtaagcctctggctcaaagtag 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 agtccttccccctcttggaaacaacccatgccggg-aagtaagcctctggctcaaagtag 439
Query: 241 tctccgtggtgcagtttccttttgaagttgccgaggtcagcttgcagtgcaaaggctgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctccgtggtgcagtttccttttgaagttgccgaggtcagcttgcagtgcaaaggctgcc 499
Query: 301 agcaggaagtaggcctcctctctgagcacacactggtagtgcagcacctgtttccgtagg 360
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 500 agcaggaagaaggcctcctctctgagcacacactgggagtgcagcacctgtttccgtagg 559
Query: 361 tgccagtaataatagtatcttgcaattcggtcactgatcagcttcccattctccacgta 419
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgccaataataatagtatcttgcaattcggtcactgatcagcttcccattctccacgta 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
