Query= MSMg01no068_l20.b1 MSMg01no068_l20.b1 CHROMAT_FILE:
MSMg01no068_l20.b1 PHD_FILE: MSMg01no068_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:16 2005
(322 letters)
>mm_chr10_44947335_44948056
Length = 722
Score = 567 bits (293), Expect = e-166
Identities = 311/317 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttaccaacaccaagggagaacactttacctgagtactcttttctcagattatc 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaccaacaccaagggagaacactttgcctgagtactcttttctcagattatc 263
Query: 64 ataagaactagaattcaacctcccagagatctccatacacactagtgtagacacctgaag 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 264 ataagaactagaattcaacctcccagagatctccgtacacactagtgtagacacctggag 323
Query: 124 gggcagctcctaatgatcactcccaattttatttgtttccctttttagctttggagactg 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gggcagcgcctaatgatcactcccaattttatttgtttccctttttagctttggagactg 383
Query: 184 gagcaaaggccgtggacataccatgccgagctcccacagagccacacctgctggcctttc 243
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 384 gagcaaaggccatggacataccatggcgagctcccacagagccacacctgctggcctttc 443
Query: 244 taagtgacttgttaaagatggactattagccagacagcctcctttcaagctcaggtccca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taagtgacttgttaaagatggactattagccagacagcctcctttcaagctcaggtccca 503
Query: 304 cctccagctagggcata 320
|||||||||||||||||
Sbjct: 504 cctccagctagggcata 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_l20.g1 MSMg01no068_l20.g1 CHROMAT_FILE:
MSMg01no068_l20.g1 PHD_FILE: MSMg01no068_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:16 2005
(534 letters)
>mm_chr10_45091142_45092076
Length = 935
Score = 957 bits (495), Expect = 0.0
Identities = 522/531 (98%), Gaps = 1/531 (0%)
Strand = Plus / Minus
Query: 5 cactctagtgggcagtagcaaaggatgctgggaagcgaggaagggaaggggaaaggaaa- 63
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 735 cactctagtgggcagtagcaaaggatgctgggaagcaaggaagggaaggggaaaggaaac 676
Query: 64 tggcatagatagcaggctcaggagaaatggatttcagtaaaaagtgagccctaagggtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tggcatagatagcaggctcaggagaaatggatttcagtaaaaagtgagccctaagggtgg 616
Query: 124 caccctgggagtcttcaggagatgtgcactaagccttaaaggcaggactgggtggctaag 183
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 caccctgggagtctgcaggagatgtgcactaagccttaaaggcaggactgggtggctaag 556
Query: 184 tgccaccaccatctagctgggacatttcctggagaacgtgccccaacttgagtgcgctgg 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 555 tgccaccaccatctagctgggacatttcctggaggacgtgccccaacttgagtgcgctgg 496
Query: 244 ggacaaagatgtatgcaggtcacatcagcttttcctaaagatttcttccagcacccaagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggacaaagatgtatgcaggtcacatcagcttttcctaaagatttcttccagcacccaagt 436
Query: 304 gctcagtgtttagggcgtcaatcgggggcaggaagtggaaacgcgtggctttgagtaaaa 363
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctcagtgtttagggcatcaatcgggggcaggaagtggaaacgcgtggctttgagtaaaa 376
Query: 364 caaaccaacaaacaaactcaaaaaccaaaaggacaacaacagcccccacaaaaccttcag 423
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 375 taaaccaacaaacaaactcaaaaaccaaaaggaaaacaacagcccccacaaaaccttcag 316
Query: 424 gagcataggtgttgagcctgatcctaaggtggtggcctctgacccacatcaggcctcaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 315 gagcataggtgttgagcctgatcctaaggtggtggcctctgacccacatcaagcctcaga 256
Query: 484 cgacagatggtacctgcctgttaaagcataacagggtgacgggtggggaca 534
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 255 cgacagatggtacctgcctgttaaagcataacagggtgatgggtggggaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space: 484700
Effective search space used: 484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
