MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-069N03
Chromosome	10 (Build37)
Map Location	88,184,548 - 88,184,654
singlet/doublet	singlet
Overlap gene	none
Upstream gene	ENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic
Downstream gene	EG237433, Arl1, Utp20, Slc5a8, Tmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6
Link	Open Mouse BAC browser

Click to get alignment info.

name	ENSMUSG00000058934 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627270 MGI:3642077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Igf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16000 MGI:96432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tyms-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22172 MGI:98879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Pmch (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110312 MGI:97629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930547N16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75317 MGI:1922567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG626115 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626115 MGI:3647484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Nup37 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69736 MGI:1919964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ccdc53 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67282 MGI:1914532
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	1200002N14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71712 MGI:1918962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gnptab (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432486 MGI:3643902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sycp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20962 MGI:109542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chpt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212862 MGI:2384841
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8030451F13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109272 MGI:1924741
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667046 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC627414 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042998 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042998
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG435236 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435236 MGI:3646504
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Spic (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20728 MGI:1341168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG237433 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237433 MGI:3643371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins

name	Arl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104303 MGI:99436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Utp20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70683 MGI:1917933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 182 ESTs, 4 Proteins

name	Slc5a8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216225 MGI:2384916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem16d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320091 MGI:2443344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gas2l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237436 MGI:1918780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nr1h4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20186 MGI:1352464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627532 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627532 MGI:3648025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs

name	Slc17a8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216227 MGI:3039629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scyl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213326 MGI:1289172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67019 MGI:1914269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000058934 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261001 GeneID:627270 MGI:3642077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, ENSMUSG00000058934 transcript_id : XM_001476525.1

name	Igf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892662 GeneID:16000 MGI:96432
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 1 transcript_id : NM_010512.3

name	Igf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227242 GeneID:16000 MGI:96432
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor 1 transcript_id : NM_184052.2

name	Pmch (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215534 GeneID:110312 MGI:97629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pro-melanin-concentrating hormone transcript_id : NM_029971.2

name	4930547N16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126215543 GeneID:75317 MGI:1922567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930547N16 gene transcript_id : NM_029249.2

name	Nup37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312385 GeneID:69736 MGI:1919964
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 37 transcript_id : NM_027191.1

name	Nup37 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370843 GeneID:69736 MGI:1919964
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 37 transcript_id : NM_028334.2

name	Ccdc53 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802694 GeneID:67282 MGI:1914532
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 53 transcript_id : NM_026070.2

name	1200002N14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366339 GeneID:71712 MGI:1918962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1200002N14 gene transcript_id : NM_027878.2

name	Gnptab (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579826 GeneID:432486 MGI:3643902
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits transcript_id : NM_001004164.2

name	Sycp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755703 GeneID:20962 MGI:109542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptonemal complex protein 3 transcript_id : NM_011517.1

name	Chpt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38604066 GeneID:212862 MGI:2384841
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : choline phosphotransferase 1 transcript_id : NM_144807.2

name	8030451F13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254302 GeneID:109272 MGI:1924741
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8030451F13 gene transcript_id : NM_175418.3

name	Spic (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:26324128 GeneID:20728 MGI:1341168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Spi-C transcription factor (Spi-1/PU.1 related) transcript_id : NM_011461.2

name	EG237433 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388527 GeneID:237433 MGI:3643371
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 6 Proteins product : predicted gene, EG237433 transcript_id : XM_137275.3

name	Arl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348858 GeneID:104303 MGI:99436
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor-like 1 transcript_id : NM_025859.2

name	Utp20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261104 GeneID:70683 MGI:1917933
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 182 ESTs, 4 Proteins product : UTP20, small subunit (SSU) processome component, homolog (yeast), transcript variant 1 transcript_id : XM_125867.9

name	Slc5a8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347554 GeneID:216225 MGI:2384916
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 5 (iodide transporter), member 8 transcript_id : NM_145423.2

name	Tmem16d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52546978 GeneID:320091 MGI:2443344
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 16D (eight membrane-spanning domains) transcript_id : NM_178773.4

name	Gas2l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407057 GeneID:237436 MGI:1918780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest-specific 2 like 3 transcript_id : NM_001033331.2

name	Gas2l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120407061 GeneID:237436 MGI:1918780
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth arrest-specific 2 like 3 transcript_id : NM_001079876.1

name	Nr1h4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677830 GeneID:20186 MGI:1352464
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 1, group H, member 4 transcript_id : NM_009108.1

name	EG627532 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261106 GeneID:627532 MGI:3648025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 34 ESTs product : predicted gene, EG627532 transcript_id : XM_892204.3

name	Slc17a8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328517 GeneID:216227 MGI:3039629
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 transcript_id : NM_182959.2

name	Scyl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130768 GeneID:213326 MGI:1289172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SCY1-like 2 (S. cerevisiae) transcript_id : NM_198021.2

name	Actr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361108 GeneID:67019 MGI:1914269
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP6 actin-related protein 6 homolog (yeast) transcript_id : NM_025914.2

name	ENSMUSG00000058934 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261002 GeneID:627270 MGI:3642077
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476575.1

name	Igf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34576545 CCDS:CCDS24103.1 GeneID:16000 MGI:96432
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005159 - insulin-like growth factor receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0018445 - prothoracicotrophic hormone activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0035264 - body growth [Evidence IDA]; GO:0048468 - cell development [Evidence IMP]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence IC] [Evidence IDA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : insulin-like growth factor 1 isoform 2 protein_id : NP_908941.1

name	Igf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754308 CCDS:CCDS24104.1 GeneID:16000 MGI:96432
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005179 - hormone activity [Evidence IEA]; GO:0005159 - insulin-like growth factor receptor binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0018445 - prothoracicotrophic hormone activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0035264 - body growth [Evidence IDA]; GO:0048468 - cell development [Evidence IMP]; GO:0010001 - glial cell differentiation [Evidence IMP]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence IC] [Evidence IDA]; GO:0007399 - nervous system development [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0007582 - physiological process [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : insulin-like growth factor 1 isoform 1 protein_id : NP_034642.1

name	Pmch (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71361678 CCDS:CCDS24105.1 GeneID:110312 MGI:97629
definition	codon_start : 1 note : melanin-concentrating hormone product : pro-melanin-concentrating hormone protein_id : NP_084247.1

name	4930547N16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90819235 GeneID:75317 MGI:1922567
definition	codon_start : 1 product : hypothetical protein LOC75317 protein_id : NP_083525.1

name	Nup37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312386 CCDS:CCDS24107.1 GeneID:69736 MGI:1919964
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : nucleoporin Nup37 product : nucleoporin 37 protein_id : NP_081467.1

name	Nup37 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312212 CCDS:CCDS24107.1 GeneID:69736 MGI:1919964
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : nucleoporin Nup37 product : nucleoporin 37 protein_id : NP_082610.1

name	Ccdc53 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313034 CCDS:CCDS24108.1 GeneID:67282 MGI:1914532
definition	codon_start : 1 product : coiled-coil domain containing 53 protein_id : NP_080346.1

name	1200002N14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229121 CCDS:CCDS24109.1 GeneID:71712 MGI:1918962
definition	codon_start : 1 product : damage-regulated autophagy modulator protein_id : NP_082154.2

name	Gnptab (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84579827 CCDS:CCDS24110.1 GeneID:432486 MGI:3643902
definition	codon_start : 1 product : N-acetylglucosamine-1-phosphate transferase protein_id : NP_001004164.2

name	Sycp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755704 CCDS:CCDS24111.1 GeneID:20962 MGI:109542
definition	GO_component : GO:0000793 - condensed chromosome [Evidence IDA]; GO:0000800 - lateral element [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA]; GO:0000795 - synaptonemal complex [Evidence IDA]; GO:0000802 - transverse filament [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0000705 - achiasmate meiosis I [Evidence IDA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0051309 - female meiosis chromosome separation [Evidence NAS]; GO:0007066 - female meiosis sister chromatid cohesion [Evidence IDA]; GO:0007126 - meiosis [Evidence IDA]; GO:0007067 - mitosis [Evidence IDA]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0007129 - synapsis [Evidence IMP]; GO:0007130 - synaptonemal complex formation [Evidence IDA] codon_start : 1 exception : mismatches in translation product : synaptonemal complex protein 3 protein_id : NP_035647.1

name	Chpt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38604067 CCDS:CCDS24112.1 GeneID:212862 MGI:2384841
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence ISS]; GO:0005792 - microsome [Evidence ISS] GO_function : GO:0019992 - diacylglycerol binding [Evidence ISS]; GO:0004142 - diacylglycerol cholinephosphotransferase activity [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006657 - CDP-choline pathway [Evidence ISS]; GO:0006663 - platelet activating factor biosynthesis [Evidence ISS]; GO:0001558 - regulation of cell growth [Evidence ISS] codon_start : 1 exception : mismatches in translation product : choline phosphotransferase 1 protein_id : NP_659056.2

name	8030451F13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254303 GeneID:109272 MGI:1924741
definition	codon_start : 1 product : myosin binding protein C, slow type protein_id : NP_780627.2

name	Spic (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26324129 GeneID:20728 MGI:1341168
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Spi-C transcription factor (Spi-1/PU.1 related) protein_id : NP_035591.2

name	EG237433 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20865504 GeneID:237433 MGI:3643371
definition	codon_start : 1 product : hypothetical protein LOC237433 protein_id : XP_137275.1

name	Arl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385340 GeneID:104303 MGI:99436
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ADP-ribosylation-like 1 product : ADP-ribosylation factor-like 1 protein_id : NP_080135.1

name	Utp20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261105 GeneID:70683 MGI:1917933
definition	codon_start : 1 product : down-regulated in metastasis isoform 1 protein_id : XP_125867.5

name	Slc5a8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347555 GeneID:216225 MGI:2384916
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : apical iodide transporter; apical iodide transporter , putative product : solute carrier family 5 (iodide transporter), member 8 protein_id : NP_663398.2

name	Tmem16d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52546979 CCDS:CCDS24114.1 GeneID:320091 MGI:2443344
definition	codon_start : 1 product : transmembrane protein 16D protein_id : NP_848888.3

name	Gas2l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407058 CCDS:CCDS24115.1 GeneID:237436 MGI:1918780
definition	GO_process : GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 product : growth arrest-specific 2 like 3 protein_id : NP_001028503.2

name	Gas2l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120407062 GeneID:237436 MGI:1918780
definition	GO_process : GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 product : growth arrest-specific 2 like 3 protein_id : NP_001073345.1

name	Nr1h4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677831 CCDS:CCDS24116.1 GeneID:20186 MGI:1352464
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008206 - bile acid metabolism [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation function : orphan nuclear receptor note : farnesoid X receptor; retinoid X receptor interacting protein 14 product : nuclear receptor subfamily 1, group H, member 4 protein_id : NP_033134.1

name	EG627532 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027605 GeneID:627532 MGI:3648025
definition	codon_start : 1 product : similar to Zinc finger and BTB domain containing 5 protein_id : XP_897297.1

name	Slc17a8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33695072 CCDS:CCDS24117.1 GeneID:216227 MGI:3039629
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0030672 - synaptic vesicle membrane [Evidence IDA] GO_function : GO:0005313 - L-glutamate transporter activity [Evidence IDA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0015813 - glutamate transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : vesicular glutamate transporter-3 protein_id : NP_892004.1

name	Scyl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574121 GeneID:213326 MGI:1289172
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : D10Ertd802e protein protein_id : NP_932138.1

name	Actr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313172 CCDS:CCDS24118.1 GeneID:67019 MGI:1914269
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] codon_start : 1 product : actin-related protein 6 protein_id : NP_080190.1

name	LOC667000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667000
definition	number : 1 pseudo : _no_value

name	LOC667046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667046
definition	number : 1 pseudo : _no_value

name	LOC667046 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667046
definition	number : 2 pseudo : _no_value

name	LOC627414 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627414
definition	number : 3 pseudo : _no_value

name	LOC627414 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627414
definition	number : 2 pseudo : _no_value

name	LOC627414 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627414
definition	number : 1 pseudo : _no_value

name	LOC100042998 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042998
definition	number : 2 pseudo : _no_value

name	LOC100042998 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042998
definition	number : 1 pseudo : _no_value

name	EG435236 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435236
definition	number : 1 pseudo : _no_value

name	Tyms-ps (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:24586682 GeneID:22172 MGI:98879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thymidylate synthase, pseudogene pseudo : _no_value transcript_id : NR_000040.1

name	EG626115 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261099 GeneID:626115 MGI:3647484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG626115 transcript_id : XR_035409.1

clone name	MSMg01-267J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269A04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-464J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501H20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-422J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152M24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-454E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286C09
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-069N03.T7 (MSMg01no069_n03.b1)	MSMg01-069N03.TJ (MSMg01no069_n03.g1)
ACC	AG293988	AG293989
length	727	714
length of high quality (start - end)	110 (74 - 183)	---
definition	CHROMAT_FILE: MSMg01no069_n03.b1 PHD_FILE: MSMg01no069_n03.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:16:40 2005	CHROMAT_FILE: MSMg01no069_n03.g1 PHD_FILE: MSMg01no069_n03.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:16:40 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXATGCAAGAGGATGCGC GGAATTCAAATACTTTCACTTGACAGGAGACTCATTATTTCCAGGACTGT CTGGTTTGAGCTCTAAACGAAAGTTTTTCTATTATCCAGAGGGAAGCCAT TCAACCTCTCTCTGTGGCTCAGCATCCTTTCCAAGTTGAAGGATCAGCTG GTGGTGTAATTTCTCATATATTACGGTATAAAAGAACCCAGAGATGAGAG CCCACTAATAATCATGCCCATACCTTTGTTATTGTGAAGATTCCAGGGGA CGCTGGTGTTGCTGGTTTTATCTTATTCTTCGACAACCGAGTTTCTCTGC TCCTTGACCTATCTACTAAGTCCTATGCCCCTGGTATCGTCAAGATCTGT GCCTTTGCTCCATGCTTTATGTTTTCCCTACTTTTCCCCTTTATTTTATT TTCCATCCTATTCTCCTTATTTCTTTCCTAATTTTACTCTGATTCCTCAC CATTCTCTCCACCCACCCCCTCGTTTTATTTCCTCACCCCACTTGTATAT TACCACCCTTGTTCGACACCGCCCATCTTTTTTTCCCCTTTCACCCGTCT TTTTGTCCTCTACATATATCCACCCCTTTATTATCCGCCCCTTCCCTCTA AACCCGTTGCCGCCTCCCCTATTTCCCCCTCCCTTATTTTCTCCCCTCGC CACTCTTTCAACCATCCCCCTTTTTTG	TTCAATATAGTGAGACGCCTGGAGGCCGCCTGATTCAAAAATAAAGGTGA ACTATAGAATTTTCCCAAGAAATCTATGACTCCTTTTCTCTATAACTTTC TCTCTACCTAGTGTTGGTGTTTGGCAGGGCTTAGGGTGCACTATGGATTG CAAGGAAGAATCCCATAATGTGGTCCTACAAATCATGCCCACATACACAT TGGGGATAGCTCAGTGATTTCCACCAACTCTTATCCACTTGTCCCTGACT TCTGTCCTATTAACGGACCCATTCCACATGCACCTATACCCCCCTGCTCA TTACTCTGAAAGCACTGTCATTATCTTATCACCCAGATCTTATATACATT TTCTTTTTTTTTTTTCCCCCCCCCCACCTTCTATTTAACTTAACCATTAG GATAATCCCCTTGCCACCCCTATAAAAAAAAAAATACCCTTTTTCTCTTA TTTTCACAACCCCCTTCTTATATCAATAACTACTCTACTGTTAATTTAAA TCCCCTTCCCCTTTTCCCAACCTGTTTTACACGTCTTCCCCCTTTATTAA TACCGCCCCCTTTTTTTTTATCCCATTCCCACCCCATTCCAACCCTAATT TCCGCACACCATTTTATTTCCACATCCAATTATATTACCACGTTTCATCA CTTGCAGCCTCTTTTCCCTCACTTATTCCCATACTACCCCAGCTTAAGAA TACCCTTCCCTCCA
quality values	Open. Hide. 0 3 8 8 11 8 8 9 10 12 16 20 23 18 20 20 24 31 31 28 28 30 30 28 24 37 25 20 17 20 20 19 19 8 6 6 6 8 9 9 9 9 10 10 10 9 9 9 13 21 23 31 31 33 48 48 48 41 32 25 22 18 18 15 9 9 9 9 9 12 16 12 10 19 19 28 28 43 48 47 36 36 36 36 36 37 43 40 43 34 33 28 30 23 18 33 33 33 25 25 25 43 40 42 35 35 37 40 32 30 12 19 8 8 8 12 19 25 36 40 37 37 35 35 35 35 42 43 44 48 57 57 57 57 38 36 22 22 22 22 39 37 37 37 37 35 35 42 42 32 32 32 28 28 36 44 46 47 54 50 48 32 29 13 13 11 16 16 24 26 19 23 23 40 40 42 39 37 28 24 15 15 12 12 12 14 23 19 19 13 12 12 16 27 31 33 36 39 33 24 21 14 14 15 16 22 16 15 11 12 12 25 25 24 21 12 12 12 24 24 16 12 8 8 8 10 8 12 12 12 12 12 12 11 11 15 15 24 24 23 23 20 25 22 23 22 11 11 11 16 16 18 15 14 19 13 11 11 11 12 12 11 11 12 15 10 8 8 10 10 13 12 12 12 12 12 12 15 10 9 9 9 10 10 15 18 12 13 14 13 14 12 25 12 12 12 16 12 13 13 18 18 24 23 12 12 11 11 13 19 19 22 15 11 8 8 10 8 10 6 6 8 8 8 9 9 9 9 10 15 8 8 6 6 8 8 8 10 9 10 10 10 15 12 19 13 13 11 11 11 11 11 8 8 13 15 8 9 12 11 16 8 8 8 8 9 9 12 12 11 11 10 9 8 10 10 10 10 16 18 18 11 13 12 11 16 11 9 9 9 10 9 9 10 10 9 9 9 10 9 9 8 8 8 8 8 8 8 8 8 8 8 10 11 9 8 8 8 8 8 10 13 10 11 9 9 6 8 6 6 8 8 10 11 11 12 15 15 10 10 12 10 9 9 12 12 12 10 13 11 12 12 9 9 9 9 10 10 10 10 10 7 8 7 7 8 8 8 8 8 10 10 11 11 14 11 11 11 16 9 8 10 10 8 9 8 8 8 10 10 8 8 8 12 8 8 8 10 8 8 8 8 8 8 10 8 8 8 8 8 8 9 8 10 9 9 11 10 10 10 8 8 8 8 8 9 8 9 8 8 8 8 8 6 6 8 8 8 10 9 9 9 9 8 8 8 8 8 8 10 13 12 10 10 9 9 9 8 8 6 6 8 10 10 7 7 6 6 8 8 8 8 9 8 8 8 8 8 8 9 12 16 11 10 9 9 10 11 14 14 10 10 10 10 10 10 10 10 11 12 16 12 16 11 11 9 13 14 15 10 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 8 8 15 8 8 8 10 11 12 16 12 13 13 14 9 8 8 8 8 10 8 8 8 9 9 12 13 8 8 6 6 6 8 6 6 6 6 8 8 10 10 11 8 8 8 8 8 8 10 12 14 9 11 11 11 11 11 12 9 9 9 10 12 8 8 8 10 10 13 12 12 8 8 8 8 11 11 9 11 11 10 16 10 10 10 10 10 12 15 16 12 12 11 12 21 18 21 21 15 16 11 11	Open. Hide. 9 9 9 10 9 6 6 6 6 8 8 8 6 6 6 7 9 12 14 19 19 11 11 11 13 12 16 20 20 24 25 12 12 11 17 12 11 11 12 8 8 8 8 8 8 13 21 19 10 12 15 32 29 27 33 18 17 11 18 12 12 16 14 14 15 6 8 6 7 8 12 13 11 16 18 28 23 23 11 11 11 18 22 22 23 25 25 37 37 43 57 47 40 40 35 39 35 39 39 57 47 47 43 39 33 30 30 31 32 21 19 13 17 18 13 11 11 12 13 11 11 16 10 10 11 13 13 10 15 12 15 12 11 10 10 11 11 13 13 10 10 10 10 13 15 15 14 14 11 11 11 11 15 22 24 22 17 15 10 15 10 10 10 15 15 15 12 9 9 9 10 9 9 19 25 13 11 8 8 8 10 11 18 17 19 28 30 27 24 12 11 9 9 12 15 12 10 10 8 8 8 10 8 8 11 11 12 12 11 19 21 19 12 12 8 8 6 6 8 6 10 12 12 11 10 10 10 10 9 9 10 10 10 10 11 11 11 11 11 11 11 18 25 26 20 19 21 13 13 13 15 10 12 8 8 8 8 9 11 15 13 8 8 8 8 10 10 10 11 9 9 10 22 22 12 12 12 21 16 12 12 11 8 8 8 8 8 9 11 11 11 11 12 20 16 11 11 10 13 15 14 14 13 22 19 14 12 13 13 12 9 9 9 9 12 10 15 10 10 9 8 8 8 8 8 8 9 19 21 28 18 19 11 9 9 9 9 15 12 11 10 8 8 6 6 6 8 9 9 9 10 15 14 16 15 19 19 24 24 25 15 14 12 9 11 8 9 9 9 10 10 15 8 8 6 6 8 8 14 13 9 9 9 9 9 9 9 9 9 11 10 11 11 12 15 16 11 12 11 11 10 10 12 10 8 8 8 8 8 8 8 8 8 8 6 6 8 6 12 18 8 8 8 8 8 8 12 16 15 10 10 10 10 10 12 6 6 8 8 8 8 8 10 10 10 10 11 8 8 8 15 10 10 8 8 8 6 6 6 6 8 12 8 8 8 14 13 11 8 8 8 8 8 8 6 6 7 10 10 11 11 10 10 10 8 8 6 6 6 6 8 6 8 8 8 18 12 8 8 8 8 10 14 11 11 11 11 12 12 15 15 12 17 10 10 10 10 10 10 10 8 8 8 8 8 8 10 8 8 8 8 8 6 6 8 8 13 10 12 12 12 18 21 19 12 10 9 8 8 9 9 10 8 8 6 6 8 8 10 12 12 19 14 15 12 11 9 8 8 10 10 10 10 11 11 12 9 9 12 9 9 9 13 13 13 10 8 12 8 8 8 9 9 9 9 9 11 11 11 11 11 8 8 8 8 8 8 8 8 8 10 16 15 12 8 8 8 12 16 10 8 8 8 8 8 8 8 9 11 11 9 9 8 10 10 10 12 10 8 8 6 6 8 8 12 8 8 11 11 9 15 10 9 10 10 11 11 11 12 12 10 10 10 10 10 11 10 10 8 10 6 6 8 6 9 9 12 8 10 10 10 10 10 10 10 10 10 8 8 6 6 6 6 6 6 8 8 8 8 8 8 8 8 8 13 9 9 9 9 9 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no069_n03.b1 MSMg01no069_n03.b1 CHROMAT_FILE:
MSMg01no069_n03.b1 PHD_FILE: MSMg01no069_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:40 2005
         (110 letters)



>mm_chr10_88184348_88184856
          Length = 509

 Score =  194 bits (100), Expect = 2e-54
 Identities = 106/108 (98%), Gaps = 1/108 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggagactcattatttccaggactgtctggtttgagctctaaacgaaagtttttctatt 60
           |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 307 caggagactcattatttccaggactgtctggtttgagctccaaacgaaag-ttttctatt 249

                                                           
Query: 61  atccagagggaagccattcaacctctctctgtggctcagcatcctttc 108
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 atccagagggaagccattcaacctctctctgtggctcagcatcctttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 509
Length adjustment: 8
Effective length of query: 102
Effective length of database: 501
Effective search space:    51102
Effective search space used:    51102
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information