Query= MSMg01no071_e23.b1 MSMg01no071_e23.b1 CHROMAT_FILE:
MSMg01no071_e23.b1 PHD_FILE: MSMg01no071_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:40 2005
(221 letters)
>mm_chr10_25065830_25066450
Length = 621
Score = 391 bits (202), Expect = e-113
Identities = 217/222 (97%), Gaps = 1/222 (0%)
Strand = Plus / Plus
Query: 1 aattgcattggtatgtaatagaaatcaatcaagtctgtcattcatataaaatagtatttc 60
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aattgcattggcatgtaatagaaatcaatgaagtctgtcattcatataaaatagtatttc 260
Query: 61 gtcttcattgttcatacacacttaaagatgacaaagatagtctctgttagggcatgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttcattgttcatacacacttaaagatgacaaagatagtctctgttagggcatgagga 320
Query: 121 ctctctgagggccagagacagtaaccagaattcctgaatccttgtatttttgtt-gttgt 179
||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 321 ctctctgagggccagagacagcaaccagaattcctgaatccttgtatttttttttgttgt 380
Query: 180 tgttgttgttgttccatatttactgtccaccagactctggac 221
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttgttgttgttccatatttactgtccaccagactctggac 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no071_e23.g1 MSMg01no071_e23.g1 CHROMAT_FILE:
MSMg01no071_e23.g1 PHD_FILE: MSMg01no071_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:40 2005
(211 letters)
>mm_chr10_25246532_25247142
Length = 611
Score = 340 bits (176), Expect = 3e-98
Identities = 200/210 (95%), Gaps = 6/210 (2%)
Strand = Plus / Minus
Query: 1 ttctcaggcagccggtgagctttctgttggcacaacttgcaagttttaactctcagatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttctcaggcagccggtgagctttctgttggcacaacttgcaagttttaactctcagatca 348
Query: 61 actgacaacatttgtttctccgtcttaatagcacccaattctatccagactatctgttgg 120
|||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 actgac-ac--ttgtttcttcgtcttaatagcacccaattctatccagactatctgttgg 291
Query: 121 gcctttcagagttgtgtaatttctaagtgttcatgccatttg---gaagtaacactatac 177
|||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 290 gcctttcagaattgggtaatttctaagtgttcatgccatttggaagaagtaacactattc 231
Query: 178 tttcggttttgggaaggatctcttttttta 207
||||||||||||||||||||||||||||||
Sbjct: 230 tttcggttttgggaaggatctcttttttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
