Query= MSMg01no072_e12.b1 MSMg01no072_e12.b1 CHROMAT_FILE:
MSMg01no072_e12.b1 PHD_FILE: MSMg01no072_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:58 2005
(556 letters)
>mm_chr10_32373354_32374309
Length = 956
Score = 984 bits (509), Expect = 0.0
Identities = 539/549 (98%)
Strand = Plus / Plus
Query: 7 gaattcaggcttgaccaaagaagaggaccaagtgttcttcattctcccttatacgctatc 66
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaggcttgaacaaagaagaggaccaagtgttcttcattctcccttatacgctatc 266
Query: 67 ctggacttccctatatgtcatcacttggtcagtctgtccagcaagtaatattggatggat 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctggacttccctatatgtcatcacttggtcagtctgtccagcaagtaatattggatggat 326
Query: 127 gtcataaacagacatggatttgccaggacctgtacgttctccacagaatcatcagctatg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gtcataaacagacatggatttgccaggacctgtacgttctccacagaatcatcagctatg 386
Query: 187 gaacttgtttttgattctttattagaccattggtttcttttacttgcagtctcaaactta 246
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 387 aaacttgtttttgattctttattagactatttgtttcttttacttgcagtctcaaactta 446
Query: 247 aagtcccagagatcccggaagcattgggaaggcagggcagatcttctgggggaggtgggg 306
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atgtcccagagatcccggaagcattgggaaggcagggcagatcttctgggggaggtgggg 506
Query: 307 catggggcagaacctcattcctgaacaggaattaaccctgatatagcaaacttaacatta 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 catggggcagaacctcattcctgaacaggaattaaccctgatatagcaaacttaacatta 566
Query: 367 tattgtccaagtaagggctaatattttattagtcaaaatatgctgttctacttattggct 426
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 567 tattgtccaagtaagggctaatattttattagtccaaatatgctgttctacttattggct 626
Query: 427 ggaatggcatggaactttcctacataacagaattatctcagcattgaggtacaaaaaaaa 486
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 627 ggaatggtatggaactttcctacataacagaattatctcagcattgaggtaaaaaaaaaa 686
Query: 487 atcccattgtttctctaaccctatatttctggggtacattgggctcagaggaaactgttg 546
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 687 atcccattgtttctctaaccctatatttcttgggtacgttgggctcagaggaaactgttg 746
Query: 547 atgcatgtc 555
|||||||||
Sbjct: 747 atgcatgtc 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_e12.g1 MSMg01no072_e12.g1 CHROMAT_FILE:
MSMg01no072_e12.g1 PHD_FILE: MSMg01no072_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:58 2005
(174 letters)
>mm_chr10_32512608_32513181
Length = 574
Score = 244 bits (126), Expect = 3e-69
Identities = 172/210 (81%), Gaps = 36/210 (17%)
Strand = Plus / Minus
Query: 1 attcttgctatttttttttcagggtatacactttgcatttggagttgtgtgtactatgct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 attcttgctatttttttttcagggtatacactttgcatttggagttgcgtgtactatgct 265
Query: 61 gccagcatttccatggcctatgttcaacttttacatcctcctgttgataacaca------ 114
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 gccagcatttccatggcctatgttcaacttttacatcctcctgctgataacacatgcaca 205
Query: 115 ----------------cgcacacacaca--------------caccataaaatatatgtg 144
|||||||||||| ||||||||||||||||||
Sbjct: 204 cacatgcacacgaacacgcacacacacatacacacacacacacaccataaaatatatgtg 145
Query: 145 gtgattatgatgatggtggtggtggtggtt 174
||||||||||||||||||||||||||||||
Sbjct: 144 gtgattatgatgatggtggtggtggtggtt 115
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
