Query= MSMg01no075_b20.b1 MSMg01no075_b20.b1 CHROMAT_FILE:
MSMg01no075_b20.b1 PHD_FILE: MSMg01no075_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:42 2005
(313 letters)
>mm_chr10_54009121_54009833
Length = 713
Score = 555 bits (287), Expect = e-162
Identities = 304/311 (97%), Gaps = 4/311 (1%)
Strand = Plus / Minus
Query: 7 aatccaaacagaccatttatctcctaaaaagatgttttcatttgtaaggacaaattagag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aatccaaacagaccatttatctcctaaaaagatgttttcatttgtaaggacaaattagag 411
Query: 67 tttccttcagtacaatttcaaaactggtcttgagtatccactaaggatcatactatgtct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 410 tttccttcagtacaatttcaaaactggtcttgagtatccactaaggatcatacaatgtct 351
Query: 127 tggatccattaggaaatttaagacaagacacatcctctatcctcaagaggctcccacatc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tggatccattaggaaatttaagacaagacacatcctctatcctcaagaggctcccacatc 291
Query: 187 aattcaagaagctttaaaacaacaatcagtaggacaaatagaacagaagtacaaaaaaat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aattcaagaagctttaaaacaacaatcagtaggacaaatagaacagaagtacaaaaaaat 231
Query: 247 gtaccagcagagatgccaaaactttgtgtgtgtgtgtgtgtgtgtgtgtgtg--tgtatg 304
||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 230 gtatcagcagagatgccaaaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtatg 171
Query: 305 tgtg--tgtgt 313
||| |||||
Sbjct: 170 agtgcatgtgt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_b20.g1 MSMg01no075_b20.g1 CHROMAT_FILE:
MSMg01no075_b20.g1 PHD_FILE: MSMg01no075_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:42 2005
(550 letters)
>mm_chr10_53992609_53993558
Length = 950
Score = 1009 bits (522), Expect = 0.0
Identities = 543/550 (98%)
Strand = Plus / Plus
Query: 1 tatatccagatctgcaggcagcaggaaggaaggaagattatatactgctaggcctggttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tatatccagatctgcaggcagcaggaaggaaggaagattatatactgctagacctggttt 260
Query: 61 tgaacttctgaaacctcaaagcctaccccctggtggtacacttcctccaacaaagcccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaacttctgaaacctcaaagcctaccccctggtggtacacttcctccaacaaagcccca 320
Query: 121 cctaccacaacaagaccagacttccaaatagtgccacttcctgtgagcctatgggggcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctaccacaacaagaccagacttccaaatagtgccacttcctgtgagcctatgggggcca 380
Query: 181 gtctttcaaactctcatataccctggtgatcattttcttttccaaggttctgacttggta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gtctttcaaactctcatataccctggtgattattttcttttccaaggttctgacttggta 440
Query: 241 tatcaaactccatgtattctttgttccactgggggctcccaaggatacaggtcctttttg 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 tatcaaactccatgtattctttgttccactgggggcccccaaggatacaggtcctttttg 500
Query: 301 ttttagctctacttctctctcccaattaaatgtcttcctttctaagagttgccatgattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttagctctacttctctctcccaattaaatgtcttcctttctaagagttgccatgattt 560
Query: 361 tattaataactatgtaaagtttctattctctttttgaaggcaagatcttgcttcaagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 tattaataactatgtaaagtttctattctctttttgaaggcaagatcttgcttgaagtat 620
Query: 421 cctgaaactcaagtatccttagatttcaagtgtattctgactctgtctccaactgaactg 480
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 cctgaaactcaagtatcgttagatttcaagtgtattctgactctgtgtccaactgaactg 680
Query: 481 ggacatttccactaacagaactcttttaattttaagtttatacgcatatacattcatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 681 ggacatttccactaacagaactcttttaattttaagtttatacgcatatacatgcatgca 740
Query: 541 tgggtatggt 550
||||||||||
Sbjct: 741 tgggtatggt 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
