Query= MSMg01no078_c03.b1 MSMg01no078_c03.b1 CHROMAT_FILE:
MSMg01no078_c03.b1 PHD_FILE: MSMg01no078_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:21 2005
(654 letters)
>mm_chr14_52905254_52906307
Length = 1054
Score = 1232 bits (637), Expect = 0.0
Identities = 646/649 (99%), Gaps = 1/649 (0%)
Strand = Plus / Minus
Query: 7 gaattcc-acactcacgagataagaggcagatggtgaaatctctgagtttggctagcctg 65
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980 gaattccaacactcaggagataagaggcagatggtgaaatctctgagtttggctagcctg 921
Query: 66 atctacctatgtgaattctaagtcagttagggctacatagtgagaacctatctcaaaaac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 atctacctatgtgaattctaagtcagttagggctacatagtgagaacctatctcaaaaac 861
Query: 126 agaaaaggacaattcattccccacaatccttgggactatacagcatacaagctaaaccca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 agaaaaggacaattcattccccacaatccttgggactatacagcatacaagctaaaccca 801
Query: 186 cttgtatttctagaatacgtttttaaagttgcaatgcatgggcaatgagagcagagaagc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cttgtatttctagaatacgtttttaaagttgcaatgcatgggcaatgagagcagagaagc 741
Query: 246 tgaagtgcagacagatgtctgtcatcaaacacacgacatggagatgtgatactgacaaag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgaagtgcagacagatgtctgtcatcaaacacacgacatggagatgtgatactgacaaag 681
Query: 306 tgctggaaaccataaacgtttatggtatcagtctacaattactatagttggtccagccca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgctggaaaccataaacgtttatggtatcagtctacaattactatagttggtccagccca 621
Query: 366 ttttttaataaatcacgcaatgtgacacttacacattagaattccagaatatgaaggcta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttttttaataaatcacgcaatgtgacacttacacattagaattccagaatatgaaggcta 561
Query: 426 ttacaaaaaacaagaccctttttaaaactataaataattttcataaaatactggatattt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttacaaaaaacaagaccctttttaaaactataaataattttcataaaatactggatattt 501
Query: 486 tacagtttaaaattattttttcaaataaatcttattcaggtaaaatgaagtctttgttgt 545
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 500 tacagtttaaaattattttttcaaaaaaatcttattcaggtaaaatgaagtctttgttgt 441
Query: 546 tcagtccttgaggaaacaagtacaacccaagtttagcaggcaataaggactaacttttgt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagtccttgaggaaacaagtacaacccaagtttagcaggcaataaggactaacttttgt 381
Query: 606 cctccttaaagcattcctatgagcttgggcgagcctaccactgtgttgc 654
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctccttaaagcattcctatgagcttgggcgagcctaccactgtgttgc 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_c03.g1 MSMg01no078_c03.g1 CHROMAT_FILE:
MSMg01no078_c03.g1 PHD_FILE: MSMg01no078_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:21 2005
(539 letters)
>mm_chr10_79127983_79128921
Length = 939
Score = 1035 bits (535), Expect = 0.0
Identities = 538/539 (99%)
Strand = Plus / Minus
Query: 1 ctcggtagaccaggctggcctcaaactcaagaaatccacctggctctgttttctgagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 ctcggtagaccaggctggcctcaaactcaagaaatccacctggctctgttttctgagtgc 771
Query: 61 tgggattaaaggtgtgcaccgccaaccacccacctaggcaaagccaagaatttgtgaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tgggattaaaggtgtgcaccgccaaccacccacctaggcaaagccaagaatttgtgaaca 711
Query: 121 gaaaacgacggaaatatcatgttggagctagcatagagtaggtccttatcttttgagtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gaaaacgacggaaatatcatgttggagctagcatagagtaggtccttatcttttgagtta 651
Query: 181 atcttttctggctgccttgtgacacaggcattgaacagttttgttggggatctacaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atcttttctggctgccttgtgacacaggcattgaacagttttgttggggatctacaggtg 591
Query: 241 gggacaaccaatcatgggccaagccccagagctgctgggcctagaggcaggcaggaccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gggacaaccaatcatgggccaagccccagagctgctgggcctagaggcaggcaggaccca 531
Query: 301 gtggtcttacctggaatctcctttctatgggtcagcaccagtttgggcagctgcatggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gtggtcttacctggaatctcctttctatgggtcagcaccagtttgggcagctgcatggtg 471
Query: 361 acctggcagtgaagggcaggaggggcaggggtccccagggagggtaaccgccagcgttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 acctggcagtgaagggcaggaggggcaggggtccccagggagggtaaccgccagcgttgt 411
Query: 421 gtcattcggaacagtggtgtgccctcagcctcttgcatctcctcttcttgctctggttcc 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 410 gtcattcggaacagtggtgtgccctcagcctcttgtatctcctcttcttgctctggttcc 351
Query: 481 agggcttgggcaccctccagtctctgctctcccagtagcagggcaaaggagagactgtt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agggcttgggcaccctccagtctctgctctcccagtagcagggcaaaggagagactgtt 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
