Query= MSMg01no079_f11.b1 MSMg01no079_f11.b1 CHROMAT_FILE:
MSMg01no079_f11.b1 PHD_FILE: MSMg01no079_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:57 2005
(582 letters)
>mm_chr10_24151495_24152476
Length = 982
Score = 928 bits (480), Expect = 0.0
Identities = 567/622 (91%), Gaps = 46/622 (7%)
Strand = Plus / Plus
Query: 5 gaattctttattcaaccc---tcagtctcaatcatctgacacttatgatgatttggtacg 61
||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
Sbjct: 163 gaattctttattcaa--caaatcagtctcaatcatctgacacttatgatgatttggtaag 220
Query: 62 cttagataactttatttgtagtccgattagtactatctgttaatgaactcctaattcatt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 cttagataactttatttgtagtccgattagtactatctgttaatgaactcctaattcatt 280
Query: 122 gctactacttaaagatctaacttaggtactgtttgaaaatcctttataggtagagaattg 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 281 gctactacttaaagatctaacttaggtactgtttgaaaatccttcataggtagagaattg 340
Query: 182 tacttctgaaccttttcctctgtgcagcacacacacacacacacacatacaca------- 234
|||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 341 tacttctgtaccttttcctctgtgcagcacacacacacacacacacacacacacacacac 400
Query: 235 ----a-acacacac--cgtttatatagcattcatcttcctacctctttatcaataacttc 287
| |||||||| ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 401 acacacacacacacatcgtttatatagcactcatcttcctacctctctatcaataacttc 460
Query: 288 agatctaaagattcattacatttgtggggtttcttggtttaagtgtgc---att------ 338
|||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 461 agatctaaagattcattacatttgtggggtttcttggtttaagtgtgcgtgattctttag 520
Query: 339 ------------------gcgcaggctggcctgaaactcacaatctttctgcctcagcct 380
|||||||||||||||||||||||||||||||||||||| |||
Sbjct: 521 aaaacatcttactgcatagcgcaggctggcctgaaactcacaatctttctgcctcaacct 580
Query: 381 cctcactgtgagggtcacaatgtgtactaccatgtctgactttacagttatcgtttgttt 440
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 cctcactgagagggtcacaatgtgtactaccatgtctgactttacagttatcgtttgttt 640
Query: 441 gtggctgcgattctagaaagaaataatgtagaaggtgcattttaagctactatttctccg 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtggctgcgattctagaaagaaataatgtagaaggtgcattttaagctactatttctccg 700
Query: 501 atgtagatccctctacagaaataatcagaataggcattggaccccattctcagcgacttc 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atgtagatccctctacagaaataatcagaataggcattggaccccattctcagcgacttc 760
Query: 561 actgtgtacgatcttaaacatt 582
||||||||||| ||||||||||
Sbjct: 761 actgtgtacgaccttaaacatt 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_f11.g1 MSMg01no079_f11.g1 CHROMAT_FILE:
MSMg01no079_f11.g1 PHD_FILE: MSMg01no079_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:57 2005
(453 letters)
>mm_chr10_24310713_24311565
Length = 853
Score = 845 bits (437), Expect = 0.0
Identities = 449/453 (99%)
Strand = Plus / Minus
Query: 1 tctaattttcttaggatattttcagacgcaaaggtattggtcagaaggcaattactctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tctaattttcttaggatattttcagacgcaaaggtattggtcagaaggcaattactctgt 594
Query: 61 gtggtttgtttaacatttgcctgctcatttccttgcttgaacctgtagtctggggtagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gtggtttgtttaacatttgcctgctcatttccttgcttgaacctgtagtctggggtagag 534
Query: 121 gaggagagggaggacactctgtcttaatgaggtactccctacacattctctcaagttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaggagagggaggacactctgtcttaatgaggtactccctacacattctctcaagttaaa 474
Query: 181 ctgggctagtcctctccgctgactctaggcctgtgctaacagcaggtggcgatagagagc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 473 ctgggctagtcctctccgctgactctaggcttgtgctaacagcaggtggcgatagagagc 414
Query: 241 acaagtgttgctaaggccccagccttctcttacaggtggcaagtcaaaagtattgcgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acaagtgttgctaaggccccagccttctcttacaggtggcaagtcaaaagtattgcgaat 354
Query: 301 gagggagaatctggtcctgttttccaattgaattaagtgcaatatgaaatgtgataggtt 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gagggagaatctggccctgttttccaattgaattaagtgcaatatgaaatgtgataggtt 294
Query: 361 atgtaaatctagaagagagatactcatttattaaaatgtgtactttggagggactaatca 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atgtaaatctagaagggagatactcatttattaaaatgtgtactttggagggactaatca 234
Query: 421 ataggtttaggaggaacaaattgggatggagtg 453
| |||||||||||||||||||||||||||||||
Sbjct: 233 acaggtttaggaggaacaaattgggatggagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
