TTGCGGCGCTATACGACTCCTATAGTTCCAGATCCGCGGAATTCTTGTAG
ATTTCTCAATCATGTGTTACTGATAAAACACTTGGGATAATCTTTATATA
CCTATTGTGAACATCTAAAAATTTGTGTAAGACATGAGAAATTTTAAGGA
GATGGGACACAGGAAGGCTGCAATTAATGTGTGGGGTTTGATGTTTGTTT
TATTTTTATGATGTGGGTGCCCCTACATTTGGGGCATAGATGTTCAGAAT
TGAGATCTCATCTTGGTGGATTTTTTCTTTGATGAATATAAAGTGTCCTT
CAACATCTTTAAAATTTTGAAATTTGAAACTGGTTGAATTAATTTTTAGT
GAAAAATCTGTTTTATTAGATATTGCAAAGGCTACTCCATCTTGTTTCTT
GCTTGGAAAACCCTTTTCAGCTTTTTACTCTGAGGTAATATCTATCTTTG
TTGCTGAAGTGTTTTTTTTTTTTTTTTCCTCTTTTTTTTGTATGCAGCTC
AATTTTGGATCCTGTTTGTGCATCCACTCTGTTAGTCCATGTCTTTTTAT
TGGGCAATTGATCTCATTGAAAATGAAAGATATTAACGACCAACGATTAT
TACCTCCTGCAATGTTTATGTTGCCGCATTCTCGCCTTCTCTCTCCTCTC
ATCCTACATCAATCCCAATTTCACATCTCCCCTCCCTTCGATCTGCTTTC
TCATCTCCCTTCCTATTCTTG

GTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCT
GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA
CCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCA
GGTGACAGCAGATGCTGTCAAGGATGTGGAGAAAGAGGAACACTCCTCCA
TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGC
AGTTCCTCAGAAAATTGAACATAGTACTACCAGAGGATCCTGCAATACCT
CTCCTGGGCATATATCCAGAAGATGTTCCAACCAGTAAGAAGGACAAATA
CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG
AACCCAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTAGTACATT
TACACAATGGAGTGCTACTCACCTACTAAAAAGAATGAATTAATACTGAA
TAAATTAAAGATAATAATTTTAAGATATTTAAAATATGCTTACTTCTGGA
TGGGTAAATCATGTGCTTGGAAAATCCTCTGGAATGAAATAAAAGCAGTG
GGCTTGAAGATGATGCAATTTCTAATATATATAAAATACACACAGGACTG
GTGGAATGGCTTAGCGGGTACTGC

Query= MSMg01no079_p17.b1 MSMg01no079_p17.b1 CHROMAT_FILE:
MSMg01no079_p17.b1 PHD_FILE: MSMg01no079_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:45 2005
         (458 letters)



>mm_chr10_89471585_89472443
          Length = 859

 Score =  621 bits (321), Expect = 0.0
 Identities = 386/425 (90%), Gaps = 29/425 (6%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcttgtagatttctcaa-tcatgtgttactgataaaacacttgggataatctttat 64
           |||||||||||||||||| || ||| |||||| ||||||||||||||||||| |||||||
Sbjct: 206 gaattcttgtagatttctaaaatcacgtgttattgataaaacacttgggatagtctttat 265

                                                                       
Query: 65  atacctattgtgaacatctaaaaatttgtgtaagacatgagaaattttaaggagatggga 124
           |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 atacctattgtgaatatctaaaactttgtgtaagacatgagaaattttaaggagatggga 325

                                                                       
Query: 125 cacaggaaggctgcaattaatgtgtggggtttgatgtttgttttatttttatgatgtggg 184
           ||||||||||||||||||||||||||||||||| |||||||||||||      |||||||
Sbjct: 326 cacaggaaggctgcaattaatgtgtggggtttgttgtttgttttatt------atgtggg 379

                                                                       
Query: 185 tgcccctacatttggggcatagatgttcagaattgagatctcatcttggtggattttttc 244
           ||||| ||||||||||||||||||||||||||  ||||||||||                
Sbjct: 380 tgcccttacatttggggcatagatgttcagaaccgagatctcat---------------- 423

                                                                       
Query: 245 tttgatgaatataaagtgtccttcaacatctttaaaattttgaaatttgaaactggttga 304
                 ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ------gaatataaagtgtccttcaacatctttaaaattttgaaatttgaaactggttga 477

                                                                       
Query: 305 attaatttttagtgaaaaatctgttttattagatattgcaaaggctactccatcttgttt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 attaatttttagtgaaaaatctgttttattagatattgcaaaggctactccatcttgttt 537

                                                                       
Query: 365 cttgcttggaaaacccttttcagctttttactctgaggtaatatctatctttgttgctga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cttgcttggaaaacccttttcagctttttactctgaggtaatatctatctttgttgctga 597

                
Query: 425 agtgt 429
           |||||
Sbjct: 598 agtgt 602


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 859
Length adjustment: 10
Effective length of query: 448
Effective length of database: 849
Effective search space:   380352
Effective search space used:   380352
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)