Query= MSMg01no080_b05.b1 MSMg01no080_b05.b1 CHROMAT_FILE:
MSMg01no080_b05.b1 PHD_FILE: MSMg01no080_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:52 2005
(512 letters)
>mm_chr10_56406678_56407589
Length = 912
Score = 946 bits (489), Expect = 0.0
Identities = 504/509 (99%), Gaps = 2/509 (0%)
Strand = Plus / Minus
Query: 5 gaattcacatttccacacccaagc-aaaaaactgggaaagctaacaggaagtaaggggag 63
||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 889 gaattcacatttccaaacccaagcaaaaaaactgggaaagctaaca-gaagtaaggggag 831
Query: 64 gctctaaaaactcaaaacccttcctagaggactacttctcctggcaaggctccattccca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gctctaaaaactcaaaacccttcctagaggactacttctcctggcaaggctccattccca 771
Query: 124 taggttctagaaccttctcaaacaacaccattagctggagaccaagtgctcaaataccaa 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 taggttccagaaccttctcaaacaacaccattagctggagaccaagtgctcaaataccaa 711
Query: 184 ataccaaagtgttccacagtcctacaggcaagggattgccaaagaaacatgaaatgctct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 ataccaaagtgttccacagtcctacaggcaagggattgccaaagaaacatgaaatgctct 651
Query: 244 atatatttgcatgcagtttgtataaaatatataggcatattagatgaggaaactaagaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atatatttgcatgcagtttgtataaaatatataggcatattagatgaggaaactaagaat 591
Query: 304 gctagcaattatttctcagttttttcacctttatttttatactaaaaagaaatcctgtgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gctagcaattatttctcagttttttcacctttatttttatactaaaaagaaatcctgtgt 531
Query: 364 gatttttcttaacagagaaaaatgacttaaaatgtaaaatgatgctcaccatttggtatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatttttcttaacagagaaaaatgacttaaaatgtaaaatgatgctcaccatttggtatg 471
Query: 424 tgacaaacatgaagctattgttggatattagagataagaaaatgtggcaaattgacggca 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 470 tgacaaacatgaagctattgttggatattagagataagaaaatgtggtaaattgacggca 411
Query: 484 tgtatatgtatatacattcatacatagat 512
|||||||||||||||||||||||||||||
Sbjct: 410 tgtatatgtatatacattcatacatagat 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_b05.g1 MSMg01no080_b05.g1 CHROMAT_FILE:
MSMg01no080_b05.g1 PHD_FILE: MSMg01no080_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:52 2005
(466 letters)
>mm_chr10_56262151_56263016
Length = 866
Score = 893 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Plus
Query: 1 catcttatatttttctctctgcacatgaatatcattatgatactttctgatactgagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcttatatttttctctctgcacatgaatatcattatgatactttctgatactgagaat 260
Query: 61 gttagctctccctccagaccctttgaatcttacttttcccatctctagtgtggatgatat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 gttagctctccctccagaccctttgaattttacttttcccatctctagtgtggatgatat 320
Query: 121 attttgacaagtgttcggtactgaaatcttactttgctggcttagaccatgcatgcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttgacaagtgttcggtactgaaatcttactttgctggcttagaccatgcatgcaaac 380
Query: 181 ttgcaactcttcatgacttgaatttctttattactgagttatcatttctcccaggtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgcaactcttcatgacttgaatttctttattactgagttatcatttctcccaggtattt 440
Query: 241 gcaaatgaacagtatcaggatctgagctaggatggggaagtgctgtggaagctaggaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaatgaacagtatcaggatctgagctaggatggggaagtgctgtggaagctaggaagg 500
Query: 301 ggatcccagcatcagactaaatttactgtaggacctcactgagtttaacccctgatatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatcccagcatcagactaaatttactgtaggacctcactgagtttaacccctgatatag 560
Query: 361 gatactgtaggatttatacaaggaagataatattttacaggaatacagttgtctttctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatactgtaggatttatacaaggaagataatattttacaggaatacagttgtctttctat 620
Query: 421 tttggcatatttatagagataaaaagggaacagttaaataaactaa 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttggcatatttatagagataaaaagggaacagttaaataaactaa 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
