Query= MSMg01no080_c11.b1 MSMg01no080_c11.b1 CHROMAT_FILE:
MSMg01no080_c11.b1 PHD_FILE: MSMg01no080_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:58 2005
(625 letters)
>mm_chr10_71825377_71826400
Length = 1024
Score = 1106 bits (572), Expect = 0.0
Identities = 608/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Minus
Query: 6 ggaattcattaccagactgttgtttgaagataattatctgaagagagattcatagcatgt 65
|||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 824 ggaattcattaccagaatgttgtttgaagataattatctgaagag-tattcataccatgt 766
Query: 66 tattggggagggggctgcaatttcatttctttaacattggctatatctctttatagttaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tattggggagggggctgcaatttcatttctttaacattggctatatctctttatagttaa 706
Query: 126 aaccttagatgagcagtctttcttctaagttttccttttcaaaagataaacagctgatga 185
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 705 aaccttagatgagcagtctttcttctaagtcttccttttcaaaagattaacagctgatga 646
Query: 186 aaactccacttctcaaaccacagaaaagtccaaccttttgaaggcatccaactgattttg 245
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 645 aaactccacttctcaaaccacagaaaagtccaatcttttgaaggcatccaactgattttg 586
Query: 246 tggttggtacatgttccctgacctatcacataaggcttatttcccttaaatttctccact 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tggttggtacatgttccctgacctatcacataaggcttatttcccttaaatttctccact 526
Query: 306 tggtcatccacacactagctaataggaactcaccatcttcagatgcatggtggatagagg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tggtcatccacacactagctaataggaactcaccatcttcagatgcatggtggatagagg 466
Query: 366 gagactctgccattaaagcctttcagatctcacagggaccagtcaagaatggcaggtcct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gagactctgccattaaagcctttcagatctcacagggaccagtcaagaatggcaggtcct 406
Query: 426 ttggataatggtttcctggtcccaagaatttgtatactataatccaagctgttgtcctgt 485
||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 405 ttggataatggtttcatggtcccaagaatttgtatactgtaatccaacctgttgtcctgt 346
Query: 486 cactgaacattggagatgatttgaattcttcaataccatgctgatctcagtggtgttgct 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cactgaacattggagatgatttgaattcttcaataccatgctgatctcagtggtgttgct 286
Query: 546 attcttctctatactactctgatatttcttttcaatttccaatgagattcttttccacct 605
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 285 attcttctctatactactctgatatttcttttcaatttccaatgagattctttttcacct 226
Query: 606 tttctcgtcccatgtttcct 625
|||||| |||||||||||||
Sbjct: 225 tttctcatcccatgtttcct 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_c11.g1 MSMg01no080_c11.g1 CHROMAT_FILE:
MSMg01no080_c11.g1 PHD_FILE: MSMg01no080_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:58 2005
(455 letters)
>mm_chr10_71665100_71665954
Length = 855
Score = 849 bits (439), Expect = 0.0
Identities = 451/455 (99%)
Strand = Plus / Plus
Query: 1 cttctggtatcttgatgtttaaaaaccaatttatagagcaacttggtcatatcctgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctggtatcttgatgtttaaaaaccaatttatagagcaacttggtcatatcctgatga 260
Query: 61 tgtgggtagggtgagtctcaggacagcatatctgggcatgcaaaattctaaagaaacagg 120
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgggttgggtgagtctcagcacagcatatctgggcatgcaaaattctaaagaaacagg 320
Query: 121 agttggtgctatttatcagagcatttaatgtttagtttcttgaaaataaacgtgtgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 agttggtgctatttatcagagcatttaatgtttagtttcttgaaaataaacgtctgtaaa 380
Query: 181 gggaccaagaaatttatatacatggcctacagttcatactaaatttttaaagaaagtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggaccaagaaatttatatacatggcctacagttcatactaaatttttaaagaaagtgac 440
Query: 241 taaaggtctattgtgtttcatgtctgttacttcactttgaagagaattttcatcgtcgat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaggtctattatgtttcatgtctgttacttcactttgaagagaattttcatcgtcgat 500
Query: 301 gagtctgaaatggaaaatagggaaatgttaactaaattttttgaaagaaagaagagaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagtctgaaatggaaaatagggaaatgttaactaaattttttgaaagaaagaagagaaat 560
Query: 361 gttattatattcattacaaaaacagagtagaaacacataaactaagttattatcgatatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttattatattcattacaaaaacagagtagaaacacataaactaagttattatcgatatg 620
Query: 421 ttgagataagggcacacatggtatgattccactgg 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgagataagggcacacatggtatgattccactgg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
