Query= MSMg01no083_l06.b1 MSMg01no083_l06.b1 CHROMAT_FILE:
MSMg01no083_l06.b1 PHD_FILE: MSMg01no083_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:30 2005
(204 letters)
>mm_chr10_11683637_11684240
Length = 604
Score = 364 bits (188), Expect = e-105
Identities = 197/200 (98%)
Strand = Plus / Minus
Query: 5 gaattcacaaggtgggttctccatcatttgaagttttcttagaattgctgtggggtatgg 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gaattcacaaggtgggttttccatcatttgaagttttcttagaattgctgtggggtatgg 345
Query: 65 tctggagggaactggctttggattcagcttaggaggttggcttgtatgtctcaatatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tctggagggaactggctttggattcagcttaggaggttggcttgtatgtctcaatatgat 285
Query: 125 attctttagggatctctgtttgcagcttatgtcttggaaatgcaaacacagcaacatgcg 184
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 284 attctttagggatctctgtttgcagcttatgtcttggaaatgcaaaaacagaaacatgcg 225
Query: 185 gccactgtatatgtgcagca 204
||||||||||||||||||||
Sbjct: 224 gccactgtatatgtgcagca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no083_l06.g1 MSMg01no083_l06.g1 CHROMAT_FILE:
MSMg01no083_l06.g1 PHD_FILE: MSMg01no083_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:30 2005
(242 letters)
>mm_chr10_11593930_11594575
Length = 646
Score = 414 bits (214), Expect = e-120
Identities = 237/246 (96%), Gaps = 4/246 (1%)
Strand = Plus / Plus
Query: 1 ttttcagcgaggaagaaga-tgaaattatgctgtttctgaggaaatgagtggaagcagag 59
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcagtgaggaagaagaatgaaattatgctgtttctgaggaaatgagtggaagcagag 260
Query: 60 gctatcatggtaagccaaagaaggcagctgcagaagcttttctctcatctgtggaaacaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctatcatggtaagccaaagaaggcagctgcagaagcttttctctcatctgtggaaacaa 320
Query: 120 acgagcaatcaagtaaaacggaataactaacctggacatggacaacagaacatggaag-- 177
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 acgagcaatcaagcaaaacggaataactaacctggacatggacaacagaacatggagggg 380
Query: 178 -aggaggggagggggcgagggaatagtaaacatggcacaatcattgaaagcttaggacat 236
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 381 gaggaggggagggggcgagggaatagtaaacatggcacaatcattgaaagcctagtacat 440
Query: 237 gcatta 242
||||||
Sbjct: 441 gcatta 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 646
Length adjustment: 9
Effective length of query: 233
Effective length of database: 637
Effective search space: 148421
Effective search space used: 148421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
