CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCT
GAAGTTCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTAT
CTGATTTAGGATAAGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTT
GTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAG
GTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGT
TCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTC
TCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCA
CTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTC
TTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTG
TCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCCGAAGATCAAGTGAC
CACAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCT
ACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTTATCACAATTGCTC
TGTAGTAAAGCTTTAGGTCAGGCATGGTGACTCCACCAGAGGTTCTTTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCCTGCCCTCACTATCTCATG
GGATAATGCTGCCAGAAGAATGCTTTCCAGATGTGAGCCCCATTGGCTTT
TGATTTCTCAGCCTCTAGGACCATAAGACATAAACCTCTGTCTTCATAAA
TTAATTTAGTTACTTCCCTCCCCACATCCCTTGCTGCCCCAGCAGGTAGG
AGAGCTGGAGAGTTGGAGAGCTGGTCCTATCCATAACTAGCTGTAGCACT
GAGGAGAGTGGGCCCTATGGCATTGGCTGAGATAGCCAGAGCAGTCCTGG
AGAGCTCACTCTGGTAGTGCAGGTGTAGGAAAGCTAGTGGACTTACTAAC
CCAGCTACCTCTCAGGCCCCAGTCCAGGGATTTGAGTTGACCCACTCCAA
CATCTACCACATCTATGATCTGTTGGAGCACAAACAAGTGTAAAATACAG
ACAAGTACATAGGCTTTGTAGCTAGACTAACCTTAATTTGGGCCACTAAC
TTGGCACTGTGTGACCAAAACAGTAACTCTTCAGCTGGATCAGGATTCAT
TTATATGTGTGACTTAAATGTAACATCTCAGGTTAGTTTTTGGTATTTCA
AAAGCATACATACAGCTATTTGACTGCTGCTTTACAGTCTATTTGGATTC

Query= MSMg01no084_d02.g1 MSMg01no084_d02.g1 CHROMAT_FILE:
MSMg01no084_d02.g1 PHD_FILE: MSMg01no084_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:09 2005
         (623 letters)



>mm_chr10_31102572_31103594
          Length = 1023

 Score =  750 bits (388), Expect = 0.0
 Identities = 413/424 (97%), Gaps = 5/424 (1%)
 Strand = Plus / Minus

                                                                        
Query: 200  ctatccataactagctgtagcactgaggagagtgggccctatggcattggctgagatagc 259
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1023 ctatccataactagctgtagcactgaggagagcgggccctatggcattggctgagatagc 964

                                                                        
Query: 260  cagagcagtcctggagagctcactctggtagtgcaggtgtaggaaagctagtggacttac 319
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963  -----cagtcctggagagctcactctggtagtgcaggtgtaggaaagctagtggacttac 909

                                                                        
Query: 320  taacccagctacctctcaggccccagtccagggatttgagttgacccactccaacatcta 379
            ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 908  taacccagctacctcccaggccccagtccagggctttgagttgacccactccaacatcta 849

                                                                        
Query: 380  ccacatctatgatctgttggagcacaaacaagtgtaaaatacagacaagtacataggctt 439
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848  ccacatctatgatctgttggagcacaaacaagtgtaaaatacagacaagtacataggctt 789

                                                                        
Query: 440  tgtagctagactaaccttaatttgggccactaacttggcactgtgtgaccaaaacagtaa 499
            ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 788  tgtagctagactaaccttaatttgggccactaacttggcactgtggggccaaaacagtaa 729

                                                                        
Query: 500  ctcttcagctggatcaggattcatttatatgtgtgacttaaatgtaacatctcaggttag 559
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728  ctcttcagctggatcaggattcatttatatgtgtgacttaaatgtaacatctcaggttag 669

                                                                        
Query: 560  tttttggtatttcaaaagcatacatacagctatttgactgctgctttacagtctatttgg 619
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 668  tttttggtatttcaaaagcatacatacagccatttgactgctgctttacagtctatttgg 609

                
Query: 620  attc 623
            ||||
Sbjct: 608  attc 605


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)