MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-085P21
Chromosome	10 (Build37)
Map Location	41,692,342 - 41,846,788
singlet/doublet	doublet
Overlap gene	Armc2, 1700016J18Rik, LOC624784
Upstream gene	Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1
Downstream gene	Foxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63, Scml4, EG666569, C230040G06, Sobp
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gpr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140741 MGI:2155249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A530089I17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103199 MGI:2143585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Zbtb24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268294 MGI:3039618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mical1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171580 MGI:2385847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Smpd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20598 MGI:1278330
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppil6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73075 MGI:1920325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein

name	Cd164 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53599 MGI:1859568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5033413D22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75973 MGI:1923223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629461 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629461 MGI:3644617
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	2410017P07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103268 MGI:1915511
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sesn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140742 MGI:2155278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Armc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213402 MGI:1916449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700016J18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75561 MGI:1922811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC624784 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 280 ESTs, 3 Proteins

name	Foxo3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56484 MGI:1890081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lace1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215951 MGI:2148801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666540 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins pseudo : _no_value

name	Snx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54198 MGI:1860188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr2e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21907 MGI:1100526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	c222389 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:260346
definition	note : c222389 pseudo : _no_value

name	Ostm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14628 MGI:2655574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec63 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:140740 MGI:2155302
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scml4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268297 MGI:2446140
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666569 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666569 MGI:3648983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	C230040G06 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:327749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Sobp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109205 MGI:1924427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39979619 GeneID:140741 MGI:2155249
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 6 transcript_id : NM_199058.1

name	A530089I17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527219 GeneID:103199 MGI:2143585
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A530089I17 gene transcript_id : NM_133999.1

name	Zbtb24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542229 GeneID:268294 MGI:3039618
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 24 transcript_id : NM_153398.2

name	Mical1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19923870 GeneID:171580 MGI:2385847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : microtubule associated monoxygenase, calponin and LIM domain containing 1 transcript_id : NM_138315.1

name	Smpd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77539780 GeneID:20598 MGI:1278330
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingomyelin phosphodiesterase 2, neutral transcript_id : NM_009213.2

name	Ppil6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387954 GeneID:73075 MGI:1920325
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 1 Protein product : peptidylprolyl isomerase (cyclophilin)-like 6, transcript variant 1 transcript_id : XM_891672.2

name	Cd164 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130821 GeneID:53599 MGI:1859568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD164 antigen transcript_id : NM_016898.2

name	5033413D22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130598 GeneID:75973 MGI:1923223
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033413D22 gene transcript_id : NM_029493.2

name	2410017P07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801889 GeneID:103268 MGI:1915511
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410017P07 gene transcript_id : NM_026643.3

name	Sesn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71480143 GeneID:140742 MGI:2155278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sestrin 1 transcript_id : NM_001013370.1

name	Armc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131063 GeneID:213402 MGI:1916449
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 2 transcript_id : NM_001034858.2

name	1700016J18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388053 GeneID:75561 MGI:1922811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 1700016J18 gene transcript_id : XM_994504.1

name	LOC624784 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94387957 GeneID:624784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 280 ESTs, 2 Proteins product : similar to T:G mismatch-specific thymine-DNA glycosylase TDGb, transcript variant 1 transcript_id : XM_891912.2

name	LOC624784 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94387958 GeneID:624784
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 235 ESTs, 3 Proteins product : similar to T:G mismatch-specific thymine-DNA glycosylase TDGb, transcript variant 3 transcript_id : XM_899830.2

name	Foxo3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130536 GeneID:56484 MGI:1890081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box O3a transcript_id : NM_019740.2

name	Lace1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922662 GeneID:215951 MGI:2148801
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lactation elevated 1 transcript_id : NM_145743.2

name	Snx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359771 GeneID:54198 MGI:1860188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorting nexin 3 transcript_id : NM_017472.3

name	Nr2e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892952 GeneID:21907 MGI:1100526
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 2, group E, member 1 transcript_id : NM_152229.2

name	Ostm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29293830 GeneID:14628 MGI:2655574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : osteopetrosis associated transmembrane protein 1 transcript_id : NM_172416.2

name	Sec63 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981947 GeneID:140740 MGI:2155302
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC63-like (S. cerevisiae) transcript_id : NM_153055.2

name	Scml4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328393 GeneID:268297 MGI:2446140
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sex comb on midleg-like 4 (Drosophila) transcript_id : NM_172938.2

name	EG666569 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387959 GeneID:666569 MGI:3648983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG666569 transcript_id : XM_989775.1

name	C230040G06 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260705 GeneID:327749
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein C230040G06 transcript_id : XM_001476210.1

name	Sobp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117938304 GeneID:109205 MGI:1924427
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sine oculis-binding protein homolog (Drosophila) transcript_id : NM_175407.3

name	Gpr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39979620 CCDS:CCDS23802.1 GeneID:140741 MGI:2155249
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016526 - G-protein coupled receptor activity, unknown ligand [Evidence IEA]; GO:0001619 - lysosphingolipid and lysophosphatidic acid receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 6 protein_id : NP_951013.1

name	A530089I17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527220 CCDS:CCDS23803.1 GeneID:103199 MGI:2143585
definition	codon_start : 1 product : Sac domain-containing inositol phosphatase 3 protein_id : NP_598760.1

name	Zbtb24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542230 CCDS:CCDS23804.1 GeneID:268294 MGI:3039618
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence NAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] [Evidence NAS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : BMP-induced factor 1; brain specific protein 1 product : zinc finger protein 450 protein_id : NP_700447.2

name	Mical1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19923871 GeneID:171580 MGI:2385847
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005882 - intermediate filament [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IMP]; GO:0005515 - protein binding [Evidence ISS]; GO:0017124 - SH3 domain binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence ISS]; GO:0007165 - signal transduction [Evidence ISS] codon_start : 1 note : CasL interacting molecule MICAL; NEDD9 interacting protein with calponin homology and LIM domains product : microtubule associated monoxygenase, calponin and LIM domain containing 1 protein_id : NP_612188.1

name	Smpd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678031 CCDS:CCDS23805.1 GeneID:20598 MGI:1278330
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004767 - sphingomyelin phosphodiesterase activity [Evidence IMP] codon_start : 1 note : neutral sphingomyelinase 1 product : sphingomyelin phosphodiesterase 2, neutral protein_id : NP_033239.1

name	Ppil6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932250 GeneID:73075 MGI:1920325
definition	codon_start : 1 product : peptidylprolyl isomerase (cyclophilin)-like 6 isoform 1 protein_id : XP_896765.1

name	Cd164 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393787 CCDS:CCDS23806.1 GeneID:53599 MGI:1859568
definition	GO_component : GO:0005886 - plasma membrane [Evidence ISS] GO_process : GO:0007155 - cell adhesion [Evidence ISS]; GO:0007157 - heterophilic cell adhesion [Evidence ISS] codon_start : 1 note : c-Myc binding protein product : CD164 antigen protein_id : NP_058594.1

name	5033413D22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83523746 CCDS:CCDS23807.1 GeneID:75973 MGI:1923223
definition	codon_start : 1 product : hypothetical protein LOC75973 protein_id : NP_083769.1

name	2410017P07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754048 CCDS:CCDS23808.1 GeneID:103268 MGI:1915511
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC103268 protein_id : NP_080919.2

name	Sesn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71480144 CCDS:CCDS23809.1 GeneID:140742 MGI:2155278
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007050 - cell cycle arrest [Evidence IEA] codon_start : 1 exception : mismatches in translation note : p53 regulated PA26 nuclear protein product : sestrin 1 protein_id : NP_001013388.1

name	Armc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702203 GeneID:213402 MGI:1916449
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : armadillo repeat containing 2 protein_id : NP_001030030.1

name	1700016J18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388054 GeneID:75561 MGI:1922811
definition	codon_start : 1 product : hypothetical protein LOC75561 protein_id : XP_999598.1

name	LOC624784 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82932266 GeneID:624784
definition	codon_start : 1 product : similar to T:G mismatch-specific thymine-DNA glycosylase TDGb isoform 3 protein_id : XP_904923.1

name	LOC624784 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82932268 GeneID:624784
definition	codon_start : 1 product : similar to T:G mismatch-specific thymine-DNA glycosylase TDGb isoform 1 protein_id : XP_897005.1

name	Foxo3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789951 CCDS:CCDS23810.1 GeneID:56484 MGI:1890081
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0001547 - antral ovarian follicle growth [Evidence IMP]; GO:0042593 - glucose homeostasis [Evidence IMP]; GO:0006917 - induction of apoptosis [Evidence IMP]; GO:0001544 - initiation of primordial ovarian follicle growth [Evidence IMP]; GO:0001556 - oocyte maturation [Evidence IMP]; GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0045648 - positive regulation of erythrocyte differentiation [Evidence ISS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : forkhead protein FKHR2 product : forkhead box O3a protein_id : NP_062714.1

name	Lace1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922663 CCDS:CCDS23811.1 GeneID:215951 MGI:2148801
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : lactation elevated 1 protein_id : NP_665686.2

name	Snx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560433 CCDS:CCDS23812.1 GeneID:54198 MGI:1860188
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sorting nexin 3 protein_id : NP_059500.2

name	Nr2e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22726205 CCDS:CCDS23813.1 GeneID:21907 MGI:1100526
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0021960 - anterior commissure morphogenesis [Evidence IMP]; GO:0007610 - behavior [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IGI]; GO:0021987 - cerebral cortex development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0008347 - glial cell migration [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP]; GO:0045665 - negative regulation of neuron differentiation [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0021772 - olfactory bulb development [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0002073 - retina development (sensu Mammalia) [Evidence IMP]; GO:0035176 - social behavior [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : tailless homolog product : nuclear receptor subfamily 2, group E, member 1 protein_id : NP_689415.1

name	Ostm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369545 CCDS:CCDS23814.1 GeneID:14628 MGI:2655574
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0030316 - osteoclast differentiation [Evidence IMP] codon_start : 1 note : grey-lethal; grey lethal osteroperosis; grey lethal osteopetrosis product : osteopetrosis associated transmembrane protein 1 protein_id : NP_766004.1

name	Sec63 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981948 CCDS:CCDS23815.1 GeneID:140740 MGI:2155302
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : promotes implantation of embryo product : SEC63-like protein_id : NP_694695.2

name	EG666569 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94387960 GeneID:666569 MGI:3648983
definition	codon_start : 1 product : hypothetical protein protein_id : XP_994869.1

name	Scml4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328394 CCDS:CCDS23816.1 GeneID:268297 MGI:2446140
definition	codon_start : 1 exception : mismatches in translation note : sex comb on midleg-like product : sex comb on midleg-like 4 protein_id : NP_766526.2

name	C230040G06 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260706 GeneID:327749
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476260.1

name	Sobp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117938305 GeneID:109205 MGI:1924427
definition	codon_start : 1 product : sine oculis-binding protein homolog protein_id : NP_780616.4

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 33 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 32 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 31 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 30 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 29 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 28 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 27 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 26 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 25 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 24 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 23 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 22 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 21 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 20 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 19 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 18 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 17 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 16 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 15 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 14 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 13 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 12 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 11 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 10 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 9 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 8 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 7 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 6 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 5 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 4 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 3 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 2 pseudo : _no_value

name	EG629461 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629461
definition	number : 1 pseudo : _no_value

name	LOC633979 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260699 GeneID:633979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to hCG2030702 pseudo : _no_value transcript_id : XR_032514.1

name	LOC666540 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260739 GeneID:666540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : similar to U1 snRNP-specific protein C pseudo : _no_value transcript_id : XR_033198.1

clone name	MSMg01-456H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-078G16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-078F15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-136A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098C18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-262H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318H07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-085P21.T7 (MSMg01no085_p21.b1)	MSMg01-085P21.TJ (MSMg01no085_p21.g1)
ACC	AG305422	AG305423
length	1,176	1,289
length of high quality (start - end)	284 (104 - 387)	157 (74 - 230)
definition	CHROMAT_FILE: MSMg01no085_p21.b1 PHD_FILE: MSMg01no085_p21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:37:32 2005	CHROMAT_FILE: MSMg01no085_p21.g1 PHD_FILE: MSMg01no085_p21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:37:32 2005
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(41,692,342 - 41,692,625)	(41,846,635 - 41,846,788)
sequence	CTATGGCGCTAACGATCCTAAGGGAGAGGATCCGCGGAATTACTCTGTAG ACCAAGCCCTTATAGACCATAGAGACCCCTCTTGCTTCTGCCTCTCCCGT GCTGGGATTAAGCCACTACCTCCTGGCTATGTTCCTTTCAAAATGACTGT CAACCAGGGGAAGAGACAGTACAAGCCACCATTACCAAAGAGGAGACTTT TAAACAAATGCTGCTTAGGAAAGAGGGAGGCTAGAATATTTTGTTTACAG TTGTGATCCTGAGGAAAGTGATTTTTGAGAGTGGCTTAACAGTTGGTACA CAGGAAAGAAAGCCCTCTCTCAGAGGGCAGCACAAGGGGGAGAAAGGAAT TCAAGGTATAGCGTGTTCTCTTTGGAAGGGTTACCTCTTATTGACCTCAT CACAAAATGTAGACGTTGGAGGCCAATCTGTAAATACCATAATGTGGAGC TTAGCTGCGGACATGCTCGAAGTGTGCGCCAGTATAAAGGAAGTGACTCG GGCCATTTTTAGCTCTTTTCAACAATAACATCTAAGATAAAAATTTGTTG AAATTTCCACAACTAAATACTCGCCATAGCTTCTCGTATCTGCTCTTATT TAAGGTTGTTTTTATCTACCGTTACTTTCACCTCTAGTTGTTGCTTGTAG CTCTATTGATTGCATCGCTTTTTTTTTTTTTTTCTTTTATTTTCTTTTTT GTTTTTTCTTTTTTTTTTATTTTTATTTATTTTATTTCTTTCACTCTTAT TTTTTATTTTCTTTCCTTTTTCTTTTTTTTCTATTTATTTTTCTTCTTTT TATTCTCTTTTCTTTTTTTTTTTTTATTTTTTCTTTTTTTTTTTTTTTTT CTCTCTTTCATATCTTTTATTATTTACTTCCTTTTCTTTATTATTTTTTT CTATTTTTTTTTACTTTATATTCTCTTTATCTCTATATCTTTTATCTCTT TTTTTTTCTATNTTTCTTTTTCTTATTTTTTCATTCTTTCCTCTTTATCT TTTTTTTACTTTCTCTTTTTCTTTTTTTTTTTCTTCCATTTTTTCTTCTT TCTCTCTTTATTTCTTCTTCTCTTTCTTTTTTTTAATATCTCCTTCGTTT TTTTTTCTTCTGCTCTTCTTTCTCTTCTCTTTATTTTTTTCTTTCTTTTG TAATTTTCTATATTCTTTTATCTTAT	TATAGGATGGAGCCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXCCTTTGAGACCAACTCCTCCACTGCAGACCAAATAAA ATGTACCGTCACCAAAGGGTGCCCCACATCCAGTGCTTGCTGAAAGGAGC CACTTGCGGTCATAGAAGGAGGAAGAAGCCAGACTCTGAGCAGGTGCATG CCTGGGGACCTGGGGGGGGGGTGTTGTCTTTTATTTTTTATTCCTTCCTT GTTTTTTTCCTTTGTTCTCCCTTCTTCTCTCCTTCTTATTTACTTTTTTG TCTCTTTTTTCTTTATTCTCTTTTTTTTTCTTTTTTGTTTATTGTCCTTC TTTATTCATCTTTTTTTCTTTATTCTTTCTTTCTTTCTTTTTTTTTTTTT TTTTTTATTTTCTTTTATTTCTCTTTTATTTATATCTTTTTCTTTCTCCT CCTTTTTTTCTTTTCTCTTCTCTTTTTTTTTTCCTTTTTCTTTTTTTCCT TTTTTGCTTTCTTATTTTTTACTTTTTTTTTTTTTTCCTTTTTTTTATCT TTTCTCTTTTTCTTTTTTTTTTCTCTCTCTCCCCTTTTTTCTTTTTCTTT TTTTTTTTTTTTTCATTTCTTTCTCTTTTATTTTTCTTTCTTTTTTTTTC TTTCTCCCTTTCTTTTTTTTTTCCTTTTTTTTTCTTTTTTTTTAGCGTTT TTCTTCCTCTTTTTCTTATTTCCTTCTTTTTTTCTCTTTTTTTCTTTTTT TTCTTTATTTTTTTTCCTTTTTTTTTATTTTCTTTTTTTCTTCTTTTTTT TTCTTTTCTTTTTTCTTTTCTTTTTTTTTTTTTTCTTTTTTCTTTTTTTT CTTCTTTCTATTTTTTTCTTTTATCTTTCTCTTATTTTATTCCTTTTCTT TCTTTTTTTTTTCTTTTCTCTCTTTTCTTTTTTTTTTCTACTTTTCTTTT CTCTTTTTCTATCTTTCTTTATTTCCTTTTTTTTCCCTTATTTTTCTTTT TTTCTTTTTCTTTTTTTTTTTCTTATTTTACTTTTTTTATTCTTTCTTTT CTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTTTCTCTTTTTTTTTTCTTT TTTTTTTTTTTCTTATTTTTTATTTTTTTCTATCTCTTTTTTTGTTCCCT CTTTTTTTATCTTCTTTTTTCTTACTTCTTTTTCTTTTCTTTTCTTTTCT TCTCTTTCTTTTTTTCTTTTTTCTTTTTCTTTCTCTTTTTTCTTTATTTT ACCTTTTTTTAATTTTTTTTTTATTTTTTCTTTTCTCTT
quality values	Open. Hide. 9 9 9 11 10 10 10 8 10 10 10 8 8 8 8 10 8 8 8 10 8 22 22 36 36 36 36 36 41 41 37 37 37 33 39 39 32 16 16 9 9 9 21 21 33 30 31 31 29 28 19 23 18 12 9 9 9 9 8 11 8 8 8 8 10 8 8 8 15 21 33 48 48 48 48 57 50 50 50 53 38 38 38 36 38 36 36 33 41 33 37 33 33 25 25 10 9 9 10 10 11 18 19 21 22 32 28 33 33 36 28 21 24 19 15 18 30 29 40 40 47 42 42 42 42 36 36 36 42 42 47 68 68 68 68 53 50 48 48 48 48 48 48 48 59 59 59 59 57 57 44 40 43 40 42 42 42 42 35 35 35 42 42 43 43 43 57 57 47 47 47 47 47 48 48 48 48 57 54 54 54 57 57 57 57 48 48 57 50 50 48 50 50 52 52 52 57 57 57 57 57 52 52 52 57 50 57 52 52 52 52 52 52 52 43 44 43 50 39 43 43 52 52 43 43 35 43 43 57 52 52 52 57 57 57 57 57 57 57 57 59 59 59 57 57 57 52 42 42 43 43 52 43 43 35 43 43 52 57 57 57 52 43 42 43 38 38 20 21 21 36 44 57 50 59 43 43 35 43 43 42 42 33 33 32 38 38 32 33 29 43 41 44 41 32 28 28 43 33 35 32 32 33 43 36 36 43 41 41 35 41 28 27 27 42 42 42 43 44 32 36 23 23 23 36 28 35 42 32 32 20 20 24 27 30 41 36 36 25 25 25 28 37 42 39 43 43 43 36 34 18 14 14 28 28 25 25 25 40 28 24 24 15 15 20 32 32 43 59 47 46 39 39 35 28 24 29 24 20 20 32 32 34 25 26 15 16 11 10 10 13 11 11 11 12 15 15 32 41 42 48 43 43 29 29 17 19 19 19 17 11 11 11 19 15 19 22 23 29 23 24 15 15 12 11 11 23 27 39 43 32 31 22 17 17 15 17 14 12 11 12 12 13 8 8 8 8 8 24 24 24 26 14 14 14 24 28 26 19 15 15 19 21 18 18 10 10 10 10 13 15 22 17 16 22 12 12 11 12 12 11 13 9 9 10 13 15 11 13 13 11 8 8 8 8 12 16 23 20 12 11 11 11 16 18 28 34 39 34 34 25 25 22 30 30 33 31 25 25 12 11 11 11 12 12 12 12 10 10 10 10 19 21 12 10 8 8 10 10 10 9 9 8 8 8 8 8 15 13 11 11 11 11 11 11 10 10 9 9 9 9 11 11 11 18 13 13 11 12 12 12 12 12 11 11 11 11 11 16 8 8 8 10 12 15 13 10 10 9 10 11 17 14 10 9 9 12 13 10 10 8 10 8 8 8 8 13 7 7 8 8 8 9 9 15 15 10 10 10 11 10 11 11 12 12 8 8 7 6 8 8 8 8 8 8 10 10 10 9 9 9 9 9 9 12 8 8 8 8 8 8 16 10 9 9 9 9 8 8 8 8 8 8 8 8 8 8 10 13 12 12 19 16 14 14 14 14 10 10 10 10 10 9 8 8 8 8 8 8 8 8 10 8 8 10 15 12 10 8 8 8 10 10 10 13 12 8 7 7 12 12 9 9 8 12 12 11 9 9 10 10 10 10 8 6 6 8 8 10 10 14 17 9 9 9 10 10 10 10 10 8 8 8 6 6 8 8 8 8 8 13 13 13 13 8 8 10 10 10 9 8 8 10 11 11 10 10 10 10 8 8 6 6 10 10 16 16 10 8 8 6 6 8 8 13 10 9 8 10 8 8 8 9 10 10 10 10 10 11 8 8 8 8 8 8 8 7 7 8 8 8 8 8 8 11 11 18 13 15 10 10 10 8 8 8 8 8 8 10 10 10 9 9 10 16 15 14 10 14 16 13 13 10 10 10 12 13 15 15 23 29 23 19 11 11 12 15 9 7 9 9 8 8 10 10 10 10 6 6 8 10 6 6 10 10 10 9 9 12 22 33 35 15 15 8 8 8 8 9 8 10 12 10 11 11 15 10 8 8 8 8 8 9 9 10 18 19 17 24 12 13 9 9 8 8 10 9 9 9 8 8 10 12 8 8 8 10 6 6 8 8 8 8 8 8 8 8 9 10 10 10 10 8 11 8 8 8 8 7 13 12 14 14 16 18 11 9 9 8 7 3 0 3 10 10 9 9 9 10 8 6 6 8 8 6 6 8 8 8 7 6 8 8 8 8 8 10 10 10 10 12 11 12 12 19 10 8 8 6 6 8 8 10 13 13 11 9 8 8 8 10 8 10 8 11 10 10 13 10 8 7 7 10 10 9 10 9 8 8 9 9 10 8 8 6 6 8 8 8 10 12 8 8 6 6 8 8 10 8 10 8 6 8 7 7 7 6 8 10 18 18 17 17 16 14 11 11 8 8 8 8 6 6 8 8 11 10 10 15 15 10 10 11 8 8 8 8 8 8 8 6 8 8 8 8 6 8 8 10 15 11 9 9 10 8 8 10 10 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 8 12 13 13 8 8 9 6 8 6 6 8 7 8 6 6 6 6 6 8 8 8 8 8 8 6 8 8 8 8 6 9 13 12 7 7 8 6 8 8 8 8	Open. Hide. 6 6 8 6 6 6 6 6 6 6 8 8 6 9 9 9 9 9 9 10 13 9 8 9 8 8 10 17 16 19 10 10 10 19 21 33 29 28 28 33 34 36 36 37 37 42 42 36 38 42 38 53 53 53 50 50 50 41 35 23 15 9 9 9 10 14 19 12 15 11 15 15 22 22 22 22 29 37 44 57 53 53 38 38 42 42 42 42 43 53 50 50 50 53 53 53 50 50 50 41 59 30 28 19 19 11 10 10 10 17 17 34 34 37 37 40 47 39 28 24 14 14 14 31 31 39 41 42 50 50 48 48 48 47 47 38 36 42 42 42 42 47 47 59 59 59 59 47 47 43 39 39 48 48 54 47 46 43 43 43 42 42 48 48 48 48 57 48 54 54 57 57 57 54 48 48 48 48 48 48 48 57 48 48 54 57 57 57 48 47 47 43 41 41 46 41 42 44 43 43 43 47 44 46 43 41 41 41 48 48 48 48 57 57 46 43 43 43 43 43 37 39 39 25 25 11 11 11 12 12 12 11 10 10 11 11 12 18 11 8 8 6 6 8 8 19 21 12 12 10 8 8 8 8 8 8 8 8 8 10 15 8 8 8 8 8 6 7 8 9 9 8 8 8 8 8 8 10 13 8 8 8 10 10 10 12 8 8 8 10 8 9 9 9 11 10 8 8 6 6 8 8 18 12 9 9 9 9 9 8 9 10 8 8 8 10 10 8 8 8 8 8 12 10 10 12 17 17 9 9 9 9 9 9 10 9 10 11 10 8 8 8 8 8 8 8 6 6 6 6 8 13 10 9 9 12 10 13 8 8 8 13 13 11 16 10 10 10 8 8 6 6 8 6 8 8 8 8 8 8 8 8 8 8 10 8 8 8 10 9 16 16 20 22 21 22 22 28 22 22 29 19 14 10 12 8 9 9 9 8 8 8 8 11 10 6 6 6 11 8 10 10 10 11 10 12 8 8 8 13 6 6 6 6 6 6 8 8 15 13 9 9 9 9 10 11 12 10 10 6 8 8 8 10 10 16 15 15 9 9 8 8 8 8 8 8 10 8 8 8 8 10 10 10 12 16 11 11 9 14 9 9 9 9 11 17 10 10 8 8 8 8 20 21 12 10 6 6 8 8 13 10 8 8 8 9 9 14 13 18 15 10 8 8 8 8 8 14 12 8 8 8 8 12 13 10 10 10 18 12 8 8 8 8 13 8 10 11 9 10 9 12 12 13 15 8 8 8 10 10 11 10 8 8 6 6 8 10 13 8 8 6 7 10 10 13 10 11 9 8 8 8 8 8 8 8 8 8 8 12 8 8 10 10 14 11 11 10 13 10 10 10 12 10 8 8 8 12 12 18 12 19 10 10 10 10 10 10 10 10 9 11 11 11 11 11 10 10 12 10 13 10 10 10 8 8 10 12 8 8 8 8 8 10 9 9 11 10 10 9 9 13 12 12 12 9 10 10 12 15 20 28 22 17 13 9 9 9 10 10 10 10 10 15 13 10 10 10 10 10 10 8 8 8 9 10 12 15 10 10 11 11 11 9 6 13 8 8 10 8 10 8 6 6 6 8 10 10 13 12 8 8 8 8 8 8 10 10 10 10 14 13 8 10 8 8 8 8 11 11 11 12 13 15 12 14 14 15 17 21 11 11 10 8 8 11 13 15 11 14 8 8 8 8 8 10 15 20 20 16 20 11 11 11 18 11 10 10 10 10 11 8 8 8 14 14 9 9 11 11 14 12 12 14 10 9 9 12 13 10 11 10 10 10 13 12 12 6 6 6 8 6 7 7 12 10 10 10 16 11 8 8 6 7 10 10 14 14 26 25 24 15 10 9 9 9 8 8 8 8 8 10 12 11 12 12 14 10 10 9 14 9 8 10 10 10 8 8 8 8 8 8 8 8 8 11 13 11 11 11 10 15 12 13 12 12 9 9 9 11 9 9 9 9 13 13 6 6 6 10 10 10 10 10 10 9 15 12 12 10 8 8 6 6 8 6 6 8 6 6 6 6 8 8 8 6 10 7 9 12 10 11 8 8 10 10 12 15 10 8 8 7 6 8 10 8 10 7 6 8 8 8 12 13 19 12 10 10 9 12 9 8 8 10 12 8 10 10 8 6 8 8 8 8 6 6 8 8 10 9 9 9 8 8 11 9 13 12 6 6 6 6 8 8 13 11 11 11 8 7 6 10 8 8 8 8 8 8 10 12 17 19 17 13 18 11 11 11 10 10 10 10 10 16 13 14 15 17 19 20 13 14 12 10 11 11 8 8 8 8 8 8 9 9 13 10 15 10 10 10 8 8 8 8 8 8 8 8 8 7 8 8 8 8 8 8 9 9 8 8 6 6 8 8 8 8 8 12 13 10 10 10 10 11 14 14 12 12 14 19 20 15 12 12 9 9 11 7 8 8 9 11 10 10 12 8 10 8 10 12 12 21 8 8 6 7 10 10 11 10 11 10 13 7 6 6 6 8 15 22 15 13 11 11 12 14 15 15 12 12 9 6 8 6 6 6 8 13 8 8 6 6 8 8 12 10 8 8 6 6 8 8 8 8 8 8 8 8 10 12 12 8 8 6 6 10 8 6 8 8 6 8 11 13 17 11 12 9 9 10 12 10 9 7 8 10 10 8 8 6 6 8 6 7 8 8 8 8 8 8 12 17 13 15 15 13 13 9 9 10 11 10 10 10 14 16 15 15 10 10 8 8 8 6 6 10 8 8 8 10 12 14 10 10 8 8 8 11 11 10 8 7 8 8 10 13 8 8 6 6 8 8 8 8 8 8 8 8 6 10 6 7 8 10 11 11 11 11 11 9 8 8 8 8 8 7 9 12 16 9 9 9 9 10 10 15 16 13 11 8 8 8 8 8 8 13 10 11 11 11 9 9 9 12 12 10 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no085_p21.b1 MSMg01no085_p21.b1 CHROMAT_FILE:
MSMg01no085_p21.b1 PHD_FILE: MSMg01no085_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:32 2005
         (284 letters)



>mm_chr10_41692142_41692825
          Length = 684

 Score =  534 bits (276), Expect = e-156
 Identities = 282/284 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggattaagccactacctcctggctatgttcctttcaaaatgactgtcaaccaggggaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 gggattaagccactacctcctggctatgttcctttcaaaatgactgtcaaccagggggag 260

                                                                       
Query: 61  agacagtacaagccaccattaccaaagaggagacttttaaacaaatgctgcttaggaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacagtacaagccaccattaccaaagaggagacttttaaacaaatgctgcttaggaaag 320

                                                                       
Query: 121 agggaggctagaatattttgtttacagttgtgatcctgaggaaagtgatttttgagagtg 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agggaggctagaatattttgtttacagttgtgatcctgaagaaagtgatttttgagagtg 380

                                                                       
Query: 181 gcttaacagttggtacacaggaaagaaagccctctctcagagggcagcacaagggggaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttaacagttggtacacaggaaagaaagccctctctcagagggcagcacaagggggaga 440

                                                       
Query: 241 aaggaattcaaggtatagcgtgttctctttggaagggttacctc 284
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggaattcaaggtatagcgtgttctctttggaagggttacctc 484


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space:   185625
Effective search space used:   185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no085_p21.g1 MSMg01no085_p21.g1 CHROMAT_FILE:
MSMg01no085_p21.g1 PHD_FILE: MSMg01no085_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:32 2005
         (157 letters)



>mm_chr10_41846435_41846990
          Length = 556

 Score =  253 bits (131), Expect = 3e-72
 Identities = 149/155 (96%), Gaps = 1/155 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caactcctccactgcagaccaaataaaatgtaccgtcaccaaagggtgccccacatccag 60
           ||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||
Sbjct: 354 caactcctccactgcagaccaaataaaatgtacagtcaccaaagggtgtcccatatccag 295

                                                                       
Query: 61  tgcttgctgaaaggagccacttgcggtcatagaaggaggaagaagccagactctgagcag 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgcttgctgaaaggagccacttgaggtcatagaaggaggaagaagccagactctgagcag 235

                                              
Query: 121 gtgcatgcctggggacctggggggggggtgttgtc 155
           ||||||||||||||| |||||||||||| ||||||
Sbjct: 234 gtgcatgcctggggatctgggggggggg-gttgtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 556
Length adjustment: 8
Effective length of query: 149
Effective length of database: 548
Effective search space:    81652
Effective search space used:    81652
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information