Query= MSMg01no087_g16.b1 MSMg01no087_g16.b1 CHROMAT_FILE:
MSMg01no087_g16.b1 PHD_FILE: MSMg01no087_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:32 2005
(541 letters)
>mm_chr10_63826612_63827552
Length = 941
Score = 942 bits (487), Expect = 0.0
Identities = 522/535 (97%), Gaps = 4/535 (0%)
Strand = Plus / Plus
Query: 5 gaattcattttattacgaaaaatgtagaagaacttctatataaagacattgttcaggaac 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattttattatgaaaaatgtagaagaacttctatataaagacattgttcaggaac 264
Query: 65 cctcttgtgtaaagacattgctcatgaattgttttgtataaagtcattgttcaggtattg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctcttgtgtaaagacattgctcatgaattgttttgtataaagtcattgttcaggtattg 324
Query: 125 ttttgcatgaaaacattgttcaggaattgttttatataaagacattgttcacgaatctct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttgcatgaaaacattgttcaggaattgttttatataaagacattgttcacgaatctct 384
Query: 185 atcaccaccatcccttcatagtagggcatcgtccataattttagagcatctcgcctttaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 385 atcaccaccatcccttcatagtagggcatcgtccataattttagagcatctcacctttaa 444
Query: 245 attgtcttagcctgtgatgatatagaaataattgaatcaaagaaaatggactgtttataa 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 445 attgtcttagcctgtgatgatataggaataattgaatcaaagaaaatggactgtttataa 504
Query: 305 gaatgtgtcaagcttatgtttggccgtagattctcagatatttacttagctgaaatctat 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 gaatgtgtcaagcttatgtttggccatagattctcagatatttacttagctgaaatctat 564
Query: 365 gtacaaagtatttgtaatgtaaatataatatatatatacatatatatccaatgtgtatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtacaaagtatttgtaatgtaaatataatatatatatacatatatatccaatgtgtatac 624
Query: 425 atatacatatacacatacacatatacatatatacatatatacatatatatacatatatat 484
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 625 atatacatatacacatacacatacacatata--catatatacatatatatacatatatat 682
Query: 485 acacacacaca--tatatatgtatatatatatatgtatatgtatatatatatata 537
||||||||||| ||||||||||| ||| ||||| ||||| ||||||||||||||
Sbjct: 683 acacacacacacatatatatgtatgtatgtatatatatatatatatatatatata 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_g16.g1 MSMg01no087_g16.g1 CHROMAT_FILE:
MSMg01no087_g16.g1 PHD_FILE: MSMg01no087_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:32 2005
(571 letters)
>mm_chr10_63900502_63901472
Length = 971
Score = 1077 bits (557), Expect = 0.0
Identities = 560/561 (99%)
Strand = Plus / Minus
Query: 1 actggtgttctggatgactgtttttcagtgttaggtctagcatagtagatctaccaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 actggtgttctggatgactgtttttcagtgttaggtctagcatagtagatctaccaaaat 702
Query: 61 gacatcacaggggaaaattctagtaacttgcaatatttttgaataacccaatgtcaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gacatcacaggggaaaattctagtaacttgcaatatttttgaataacccaatgtcaaaaa 642
Query: 121 agcacagttctaacatcatgtaaatgttgtgactgaatactagagatgttcatggcccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agcacagttctaacatcatgtaaatgttgtgactgaatactagagatgttcatggcccat 582
Query: 181 aacttcaggtgaagcatctgtcttccacctttaatgagaaaagaagcagcattttatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aacttcaggtgaagcatctgtcttccacctttaatgagaaaagaagcagcattttatgtt 522
Query: 241 taaaattaatagcttggacacgccagaattacagggaaaatacaaagtgccttagtgcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 taaaattaatagcttggacacgccagaattacagggaaaatacaaagtgccttagtgcaa 462
Query: 301 agtgcttcacaaaatcttgcaggaatccaaccaaatcattacataaagaaaaacacatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agtgcttcacaaaatcttgcaggaatccaaccaaatcattacataaagaaaaacacatgt 402
Query: 361 gagaaattttcttcatgtcttaactactgaactgcctattcattttgcctcctgagaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gagaaattttcttcatgtcttaactactgaactgcctattcattttgcctcctgagaata 342
Query: 421 tgcagtgttcaccaagatggatattggcagacacagattggccatggaggagttcagaat 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgcagtgttcagcaagatggatattggcagacacagattggccatggaggagttcagaat 282
Query: 481 attattcatttataatcattaactattagttttatctttctactcttgaaaacagcttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 attattcatttataatcattaactattagttttatctttctactcttgaaaacagcttat 222
Query: 541 tatgtaatgtattgtgtgtgt 561
|||||||||||||||||||||
Sbjct: 221 tatgtaatgtattgtgtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
