Query= MSMg01no088_d03.b1 MSMg01no088_d03.b1 CHROMAT_FILE:
MSMg01no088_d03.b1 PHD_FILE: MSMg01no088_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:35 2005
(604 letters)
>mm_chr10_98611981_98612984
Length = 1004
Score = 1114 bits (576), Expect = 0.0
Identities = 594/600 (99%)
Strand = Plus / Plus
Query: 5 gaattccatatattacttaaaattttaactcttaatcttttttcaacaaagattcaagaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatatattaattaaaattttaactcttaatcttttttcaacaaagattcaagaa 264
Query: 65 gaaagcaatcttcatctatttctctgtacattggcagttttagtgtgtggccttcttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaagcaatcttcatctatttctctgtacattggcagttttagtgtgtggccttcttttt 324
Query: 125 ttcttttaataacattttgttgattctttgtgagtttcacatcatcctctccccgtcccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcttttaataacattttgttgattctttgtgagtttcacatcatcctctccccgtcccc 384
Query: 185 tcagatccactctttgcagcttcttccccaaaataaaaaacacaaacaacaacaacaaaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagatccactctttgcagcttcttccccaaaataaaaaacacaaacaacaacaacaaag 444
Query: 245 catagcaaccatctgaatgtgtcgcagtgtgtcccacaggacacccctctgtccacacat 304
||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 445 catagaaaccatctgaatgtgtcacagtgtgtcccacaggacatccctctgtccacacat 504
Query: 305 cttcacttgcaaatggtcactgcgatgagtcatcggtctggtttgagatttctggcttct 364
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttcagttgcaaatggtcactgcgatgagtcatcggtctggtttgagatttctggcttct 564
Query: 365 gtgacaacatcaatactggatcctaattaggatttctcctgattgtcccgttgttgccct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgacaacatcaatactggatcctaattaggatttctcctgattgtcccgttgttgccct 624
Query: 425 gtgtcatggagatcctgcagctttggaacagcaggactagccctttcactggccccaacc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtgtcatggagatcctgcagctttggaacagcaggactagccctttcactggccccaacc 684
Query: 485 tttcgaagatgatgtaaattttagagtgggccagttcagagcctggatctgggcctgagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttcgaagatgatgtaaattttagagtgggccagttcagagcctggatctgggcctgagt 744
Query: 545 gacttctgagctagtcagcccaacaggtctcccttatccacgccaccagcactgccctgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gacttctgagctagtcagcccaacaggtctcccttatccacgccaccagcactgccctgg 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_d03.g1 MSMg01no088_d03.g1 CHROMAT_FILE:
MSMg01no088_d03.g1 PHD_FILE: MSMg01no088_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:35 2005
(593 letters)
>mm_chr10_98699532_98700523
Length = 992
Score = 1123 bits (581), Expect = 0.0
Identities = 590/593 (99%), Gaps = 1/593 (0%)
Strand = Plus / Minus
Query: 1 tttccacatgacgaagaccagtactcaaacacctttcctaagcagcacggacctgacagc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 603 tttccacatgacgaagaccagtactcaaacacctttcctaagcagca-ggacctgacagc 545
Query: 61 acagagcttcccacggagatgtggcaaggctgtgtgaactgtgtgggctgtggccacgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acagagcttcccacggagatgtggcaaggctgtgtgaactgtgtgggctgtggccacgta 485
Query: 121 ggtgagcatgtctgtaggaattctgacgtggtaagtagccctaggagacacagtcattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggtgagcatgtctgtaggaattctgacgtggtaagtagccctaggagacacagtcattct 425
Query: 181 tcgagtgtgcttgttgatgttggagtgtggcttgctctccaggactgttttcaagaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcgagtgtgcttgttgatgttggagtgtggcttgctctccaggactgttttcaagaacct 365
Query: 241 acttaaacacatatccttgggccgttggagagaagagggaaagagaaatctgtatcccct 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 364 acttaaacacatatccttgggccgttggagagaagagggaaagagaaatttgtatcccct 305
Query: 301 gccaagtttcctggataatattttaggaggaaatgatgtatgtgtcacaagactcagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gccaagtttcctggataatattttaggaggaaatgatgtatgtgtcacaagactcagaag 245
Query: 361 acagcgatggaagaagacattcttcataaataagaacttgctgcccatgttcctattatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acagcgatggaagaagacattcttcataaataagaacttgctgcccatgttcctattatt 185
Query: 421 actgcggctctgagatatagcttgaaatctgatatggtaatccctcgagggttgctcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 actgcggctctgagatatagcttgaaatctgatatggtaatccctcgagggttgctcttt 125
Query: 481 ttgctctgaattactttggcaatctggagcggtttcatgtgaattttaggattctctttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttgctctgaattactttggcaatctggagcggtttcatgtgaattttaggattctcttta 65
Query: 541 tcctatttttgtacagaatagcatgaggatttttgattggaattatactgaat 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 tcctatttttgtacagaatagcatgaggatttttgattggaattatactgaat 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 992
Length adjustment: 10
Effective length of query: 583
Effective length of database: 982
Effective search space: 572506
Effective search space used: 572506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
