Query= MSMg01no088_p13.b1 MSMg01no088_p13.b1 CHROMAT_FILE:
MSMg01no088_p13.b1 PHD_FILE: MSMg01no088_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:37 2005
(558 letters)
>mm_chr10_6377640_6378597
Length = 958
Score = 600 bits (310), Expect = e-175
Identities = 346/358 (96%)
Strand = Plus / Minus
Query: 1 gctgcatttccacaacttttatgtcaatgtctctttatcagaaaccttgcctgcacgaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 417 gctgcatttccacaacttttatgtcaatgtctctttatcagaaaccttgcatgcacaaga 358
Query: 61 tctgaagccttcttgtatatattagtttttactttaaaaaagcctcaagatgtaaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tctgaagccttcttgtatatattagtttttactttaaaaaagcctcaagatgtaaataca 298
Query: 121 ttctcagttttgtcttctcacctcccacccccataactaacggtgatggaactctgaagc 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 297 ttctcagttttgtcttctcaccttccacccccataactaacggtgatggaactccgaagc 238
Query: 181 tactattggtactatattaaatttaaaaattggataaagccgggcatggtggcgcacgcc 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 237 tactattggtactatattaaatttaaaaattagataaagccgggcatggtggcgcacgcc 178
Query: 241 tttaatcccagcacttgggaggcagaggcaggcggatttctgagttccaggccagcctgg 300
||||||| ||||||| ||||||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 177 tttaatctcagcactcaggaggcagaagcaggaggatttctgagttccaggacagcctgg 118
Query: 301 tctacaaagtgagttccaggacagccagggctacacagagaaaccctgcctcaaaaaa 358
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117 tctacaaagtgagttccaggacagccagggctatacagagaaaccctgcctcaaaaaa 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_p13.g1 MSMg01no088_p13.g1 CHROMAT_FILE:
MSMg01no088_p13.g1 PHD_FILE: MSMg01no088_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:37 2005
(581 letters)
>mm_chr10_6263975_6264954
Length = 980
Score = 1009 bits (522), Expect = 0.0
Identities = 567/582 (97%), Gaps = 3/582 (0%)
Strand = Plus / Plus
Query: 1 ctgagttcaactcctcagcagctccagaagaaaaaaaggaaaaagcaaacaaatgaagat 60
|||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagttcaaattctcagcagctacagaagaaaaaaaggaaaaagcaaacaaatgaagat 260
Query: 61 gtagccctaggatttatgggaaatagaaatgtcaacaagaactggtggaaatagtttttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagccctaggattcatgggaaatagaaatgtcaacaagaactggtggaaatagtttttt 320
Query: 121 cagatgttattttaaactatatatacacttaattcttggtttttcttttagcattccata 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 cagatgttattttaaactatatatacacttaattcttgctttttcttttagcattccata 380
Query: 181 cacctattttttatagaatacacataattctatagtctcctttatcttaaaagtataatt 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacctattttt-atagaatacacataattctatagtctcctttatcttaaaagtataatt 439
Query: 241 ttatttctgtactgcaaccttttagaatttgtgattacaaaaacagagtatataatttaa 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttatttctgtactacaaccttttagaatttgtgattacaaaaacagagtatataatttaa 499
Query: 301 ttagggtgacaaaatctgtaaaacagtccctctgttactgaacaattgg-ccagtcagcg 359
|||||||||||||||||||||||||||||| |||||||||||||||||| || |||| |
Sbjct: 500 ttagggtgacaaaatctgtaaaacagtccccctgttactgaacaattgggcc-gtcacca 558
Query: 360 gcgtgtagaaagacacactgaatttgtgctacatatgagctttaatctctttcaaagtat 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gcatgtagaaagacacactgaatttgtgctacatatgagctttaatctctttcaaagtat 618
Query: 420 attctcagaataaatttccaggggtaaggatacgggcaatagacataaaacatattttat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 619 attctcagaataaatttccaggggtaaggatacgggcaatagacataaaacatcttttat 678
Query: 480 gaccactgatacgcatttgacaagtcaaatttatggtttgaaattaatgttttaacttac 539
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 679 gaccactgatacgcatttgacaagtcaattttatggtttgaaattaatgttttaacttac 738
Query: 540 tatagaaaaggataggtttcatagcttcgctctccctgaatt 581
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tatagaaaaggataggtttcatagcttcgctctccctgaatt 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
