Query= MSMg01no092_d02.b1 MSMg01no092_d02.b1 CHROMAT_FILE:
MSMg01no092_d02.b1 PHD_FILE: MSMg01no092_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:58 2005
(211 letters)
>mm_chr10_68055911_68056521
Length = 611
Score = 375 bits (194), Expect = e-109
Identities = 205/210 (97%), Gaps = 3/210 (1%)
Strand = Plus / Plus
Query: 5 gaattcttttttttt---acacaaaattcatgcttttccaggctacacaaggaaacagca 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcttttttttttttacacaaaattcatgcttttccaggctacacaaggaaacagca 261
Query: 62 acattattctctcgttataactgcgattgttactgtgtttattgaatagctgtgtagttt 121
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 acattattctctcgttataactgggattgttactgtgtttattgaatagctgtgtagttt 321
Query: 122 ctgagggtgtgcatcttcccttgcaattgagtgatgaccttaactggtagagatttagat 181
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 ctgagggtgtgcatcttcccttgcaattgagtgatgaccttaactggtatagatttagat 381
Query: 182 aatggtgtgtgtgtgtgtgtgtgtgtgtgt 211
||||||||||||||||||||||||||||||
Sbjct: 382 aatggtgtgtgtgtgtgtgtgtgtgtgtgt 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_d02.g1 MSMg01no092_d02.g1 CHROMAT_FILE:
MSMg01no092_d02.g1 PHD_FILE: MSMg01no092_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:58 2005
(478 letters)
>mm_chr10_68192999_68193877
Length = 879
Score = 818 bits (423), Expect = 0.0
Identities = 465/481 (96%), Gaps = 5/481 (1%)
Strand = Plus / Minus
Query: 1 tctaatgattgagaaaattaaacagttcacatttgtcccaattctgtgtaagtaataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tctaatgattgagaaaattaaacagttcacatttgtcccaattctgtgtaagtaataatg 620
Query: 61 tcactgctaggaggagaagcactgagaattttaaagtaagactatttttgtgctgatgta 120
|||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcactgctgggagaagaagcactgagaattttaaagtaagactatttttgtgctgatgta 560
Query: 121 tttgagctatctgtattgatttttttcttttttttcccctctaagacaaaagaaaaaaga 180
|||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct: 559 tttgagctatctgtattgatatttttc--ttttctcccctctaagacaaaagaaaaaaga 502
Query: 181 aataaaatctctaaagatggttgtcatcttgatttccattttatacattatcagttgtgt 240
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 aataaaatctttaaagatggttgtcatcttgatttccgttttatacattatcagttgtgt 442
Query: 241 attcccatggacaatgtttggtcattagtcagcacctcaatttccttgatacccaactct 300
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 441 attctcatggacaatgtttggtcattagtcagcatctcaatttccttgatacccaagtct 382
Query: 301 cattcaagtctgacaatta---ctgtccccagtccatcatgaaacagtgactttgccttg 357
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcaagtgtgacaattacatctgtccccagtccatcatgaaacagtgactttgccttg 322
Query: 358 aaaccccatcacagaagcaatataagaggagaactggcattggatctccacaagaatgac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccccatcacagaagcaatataagaggagaactggcattggatctccacaagaatgac 262
Query: 418 acaaaaacacatcataggaagggagccattcaatgtgtgcttccaaagtccctgcaacct 477
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 acaaaaacacatcataggaagggagccattcaatgtgtgcttccaaagtcactgcaacct 202
Query: 478 t 478
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 879
Length adjustment: 10
Effective length of query: 468
Effective length of database: 869
Effective search space: 406692
Effective search space used: 406692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
