Query= MSMg01no093_a06.b1 MSMg01no093_a06.b1 CHROMAT_FILE:
MSMg01no093_a06.b1 PHD_FILE: MSMg01no093_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:05 2005
(498 letters)
>mm_chr10_16233045_16233941
Length = 897
Score = 843 bits (436), Expect = 0.0
Identities = 478/492 (97%), Gaps = 1/492 (0%)
Strand = Plus / Minus
Query: 5 gaattctcactcacattgatccctattatttgcactgcttactaaaacagtgctgaaaag 64
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 695 gaattctcactcacattgatctctagggtttgcactgcttactaaaacagtgctgaaaag 636
Query: 65 tgccactgagctagatatgtaataaagcatgtaaagtgtttaaaattggctatacctaac 124
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tg-gacagagctagatatgtaataaagcatgtaaagtgtttaaaattggctatacctaac 577
Query: 125 atcatctcttcagttaatatcatcattaactcacagttattcctgtcactgttagtagat 184
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atcatttcttcagttaatatcatcattaactcacagttattcctgtcactgttagtagat 517
Query: 185 gagtttaatatgatgaggaaataagcaattttctcatcacaataactaaacaccaacttc 244
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 516 gagtttaatatgatgaggaaataagcgtttttctcatcacaataactaaacaccaacttc 457
Query: 245 atgattgtctcaaaacaccattggctctcagttgatgaagtaggacttaagtggaggtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atgattgtctcaaaacaccattggctctcagttgatgaagtaggacttaagtggaggtga 397
Query: 305 ctaacaggctgcttcttggtattatgtgtaattatcatttactgttcaactattacctgc 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctaacagactgcttcttggtattatgtgtaattatcatttactgttcaactattacctgc 337
Query: 365 acttcacaaacttaccatctggcatccagtgggttagaaaaaaatgggaataaaaattcc 424
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acttcacaaacttacgatctggcatccagtgggttagaaaaaaatgggaataaaaattca 277
Query: 425 tacaaagttttgatgatttatcctatcacttcctactgccagagtaggtctgaattgggg 484
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 276 tacaaagttttgatgatttatcctatcacttcctaatgccagagtaggtctgaattgggg 217
Query: 485 ctccctgtgtgg 496
||||||||||||
Sbjct: 216 ctccctgtgtgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 897
Length adjustment: 10
Effective length of query: 488
Effective length of database: 887
Effective search space: 432856
Effective search space used: 432856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no093_a06.g1 MSMg01no093_a06.g1 CHROMAT_FILE:
MSMg01no093_a06.g1 PHD_FILE: MSMg01no093_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:05 2005
(448 letters)
>mm_chr10_16175094_16175940
Length = 847
Score = 772 bits (399), Expect = 0.0
Identities = 430/441 (97%), Gaps = 4/441 (0%)
Strand = Plus / Plus
Query: 5 aactaaaagagtaactttgcttaactatatatctacctctaagttttaagtgtaatgtcg 64
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 aactaaaagagtaactttgcttaactatatatctacct-taagttttaagtgtaatgtcg 263
Query: 65 tgtcatcaaattaacttgtacaaaatttgacagctcataggatgtggagggttgttcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtcatcaaattaacttgtacaaaatttgacagctcataggatgtggagggttgttcaaa 323
Query: 125 agaatatagtagaacagtttggcagtgatttaataaacagcatattccctggaactcttg 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 agaatatagtagaacagtttggcaatgatttaataaacagcatattccctggaactcttg 383
Query: 185 gcactttatcgtgggtaaatgaaaaaa-tcatgttacacaaatgttcatagcccgatttg 243
|||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 gcactttagagtggataaatgaaaaaaatcatgttacacaaatgttcatagcccgatttg 443
Query: 244 gtaacagccctaaactaaaaataacccatgttccttcagtgagtgcttaaatataaggcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtaacagccctaaactaaaaataacccatgttccttcagtgagtgcttaaatataaggcc 503
Query: 304 tatattcttgtcatattcatcaataaaatgataaatgatataaatatatacaacttagat 363
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 504 tatattcttgtcatattcatcaataaaatgagaaatgatatgaatatatacaacttagat 563
Query: 364 taaccaacagggtcttttattatgagtgataatctaaaaatacacagtatagatttcctt 423
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaccaacagggttttttattatgagtgataatctaaaaatacacagtatagatttcctt 623
Query: 424 tcaggaagaattttctataaa 444
|||||||||||||| |||||
Sbjct: 624 tcaggaagaatttt--ataaa 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 847
Length adjustment: 10
Effective length of query: 438
Effective length of database: 837
Effective search space: 366606
Effective search space used: 366606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
