Query= MSMg01no094_d10.b1 MSMg01no094_d10.b1 CHROMAT_FILE:
MSMg01no094_d10.b1 PHD_FILE: MSMg01no094_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:46 2005
(596 letters)
>mm_chr10_112944802_112945796
Length = 995
Score = 1091 bits (564), Expect = 0.0
Identities = 585/592 (98%), Gaps = 1/592 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagttcaggtccttaagcttttgaggtaagcattttattggctaacttatatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagttcaggtccttaagcttttgaggtaagcattttattggctaacttatatac 264
Query: 65 ccagcacatcacctattttattgtccattcttgttattttacaggtgatttttctttgaa 124
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagcacatcagttattttattgtccattcttgttattttacaggtgatttttctttgaa 324
Query: 125 gcaacaaacacttttgatatgcccttgttgagttatatttcctgcaattgtgacagcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcaacaaacacttttgatatgcccttgttgagttatatttcctgcaattgtgacagcttt 384
Query: 185 cttaccctattaattatctatgagttaaaaaatacctagtaaagaatgtataatttatac 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 cttaccctattaattatctatgagttaaaaa-tacctagtaaagaatgtataatttatac 443
Query: 245 tgcatatttattcctcataatgacatagaatatgaatttgaacatttcatcaataaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgcatatttattcctcataatgacatagaatatgaatttgaacatttcatcaataaaaag 503
Query: 305 aaattctatggtaaaacattaaaggatttcttccttccaaaccttctttttatctattat 364
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 504 aaattctatggtaaaacattaaaggatttctttcttccaaaccttctttttatctattat 563
Query: 365 aaccactaacattatgtctatttatccttcatttcacttggctgttaaatgtatgccata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaccactaacattatgtctatttatccttcatttcacttggctgttaaatgtatgccata 623
Query: 425 tatgacatattcagatacaaattcctttgccttctttaaatcgaaccttgaagatactat 484
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 624 tatgacatattcagatacaaattcctttgccttctttaaatcgaaccttcaagatactat 683
Query: 485 taataggagtcataactttgctatgtatctattttcacaattttttttatcttaattatc 544
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 684 taataggagtcataactttgctatgtatctattctcacaaatttttttatcttaattatc 743
Query: 545 aaaggcacattcaatgttcatgattctaaatactgtaagaacatacttagtc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaaggcacattcaatgttcatgattctaaatactgtaagaacatacttagtc 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 995
Length adjustment: 10
Effective length of query: 586
Effective length of database: 985
Effective search space: 577210
Effective search space used: 577210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no094_d10.g1 MSMg01no094_d10.g1 CHROMAT_FILE:
MSMg01no094_d10.g1 PHD_FILE: MSMg01no094_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:46 2005
(539 letters)
>mm_chr10_113029785_113030723
Length = 939
Score = 752 bits (389), Expect = 0.0
Identities = 395/397 (99%)
Strand = Plus / Minus
Query: 142 tgctgactccctgctgcctcaggctaggtggctgggcagcttctgattggctgcccatgc 201
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 939 tgctgactccctgctgcctcaggctaggtggctgggcagcttctgattggctgcccgtgc 880
Query: 202 tctgtgctttttctttgtttgtttgttttttctgtccccaccccaccccctcataactga 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 tctgtgctttttctttgtttgtttgttttttctgtccccaccccaccccctcataactga 820
Query: 262 cttgccctgacttgtccaaatctgagaaagagatttaggcctagtctcctgaactgccag 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 cttgccctgacttgtccaaatctgagaaagagatttaggcctagtctcctgaactgccag 760
Query: 322 cttgaaacctgtcatggagccccattgatgccttacctgtagataactcagacttgttaa 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cttgaaacctgtcatggagccccattgatgccttacctgtagataactcagacttgttaa 700
Query: 382 ctctgttcacagctacattgaaaagtccctaaagccaaacctatagaagcaatccagact 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 ctctgttcacagctacattgaaaagtccctaaagccaaacctatagaagcaatccagact 640
Query: 442 tcttgtagcaggagacaaaaatgaaagaatgcctttccttagagactcacgttagttaaa 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tcttgtagcaggagacaaaaatgaaagaatgcctttccttagagactcacgttagttaaa 580
Query: 502 tgactcctccagttcatcattactcatggaccccagg 538
||||||||| |||||||||||||||||||||||||||
Sbjct: 579 tgactcctctagttcatcattactcatggaccccagg 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
