Query= MSMg01no095_e03.b1 MSMg01no095_e03.b1 CHROMAT_FILE:
MSMg01no095_e03.b1 PHD_FILE: MSMg01no095_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:13 2005
(597 letters)
>mm_chr10_15116570_15117570
Length = 1001
Score = 1112 bits (575), Expect = 0.0
Identities = 589/595 (98%), Gaps = 4/595 (0%)
Strand = Plus / Plus
Query: 7 gaattccacaattacaaaaa-tgaattccacaatttagtcccttggctatcttctctaca 65
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccacaattaaaaaaaatgaattccacaatttagtcccttggctatcttctctaca 266
Query: 66 aaaacttaatttccagataatttcgtaaagtcccataagttagtagcatattaatagtaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaaacttaatttccagataatttcgtaaagtcccataagttagtagcatattaatagtaa 326
Query: 126 ctacatctagaaagatcgatttttgaaaattgttttctgaatttcactgttctattccaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctacatctagaaagatcgatttttgaaaattgttttctgaatttcactgttctattccaa 386
Query: 186 atacatatttgtgttaatgtaggtgtccagtataagtaataatgttatcgtacaaaaccc 245
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 387 atacatatttgtgttaatgtaggtgtccagtataagtaataatgttatcatacaaaaccc 446
Query: 246 aaatgccagatttgtactttttggatcttttccaaaatcttttgcaagagttaattttct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaatgccagatttgtactttttggatcttttccaaaatcttttgcaagagttaattttct 506
Query: 306 cttggcaatatgccaatttgtcaacataatacatttgtgtaccggttccattattggcag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cttggcaatatgccaatttgtcaacataatacatttgtgtaccggttccattattggcag 566
Query: 366 acatttattttttgctggttgaagtttatatccatatggataacatgaaatatatgtatt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acatttattttttgctggttgaagtttatatccatatggataacatgaaatatatgtatt 626
Query: 426 gttagctattcaacttgaggtagatttttttt---ggcacagttttagcagatgagggcc 482
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 627 gttagctattcaacttgaggtagatttttttttttggcacagttttagcagatgagggcc 686
Query: 483 aaatattcctaaaatggcacatagattgacaatgcacaaagctcttgttggaaaaggcat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aaatattcctaaaatggcacatagattgacaatgcacaaagctcttgttggaaaaggcat 746
Query: 543 attctgacaaatagttgctgtttgtacacttttccatatatattatatgtgtttg 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 attctgacaaatagttgctgtttgtacacttttccatatatattatatgtgtttg 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 1001
Length adjustment: 10
Effective length of query: 587
Effective length of database: 991
Effective search space: 581717
Effective search space used: 581717
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_e03.g1 MSMg01no095_e03.g1 CHROMAT_FILE:
MSMg01no095_e03.g1 PHD_FILE: MSMg01no095_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:13 2005
(285 letters)
>mm_chr10_15272568_15273252
Length = 685
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Minus
Query: 1 cttatataatccaataaggcttcctttcactgtcttgtggtacatgagggacttatctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cttatataatccaataaggcttcctttcactgtcttgtggtacatgagggacttatctat 425
Query: 61 ttggctctttactataagaatctagtgggatatcttgtgaatgaaaacatggcacaatct 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 424 ttggctctttactataagaatctattgggatatcttgtgaatgaaaacatggcacaatct 365
Query: 121 aaaataactatggcattcagataggtttagtagcctgttcctgagcaaaatttgagtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 364 aaaataactatggcattcagataggtttagtagcctgttcctgagcaaaatttgagtgtc 305
Query: 181 agaaaaatacttgttttgatgattgtttatacttttatgtaaaaatctttattctggaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agaaaaatacttgttttgatgattgtttatacttttatgtaaaaatctttattctggaaa 245
Query: 241 aagtgattaacacataaagaaacttaataagcacacacaggtga 284
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 244 aagtgattaacacgtaaagaaacttaataagcacacacaggtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
