Query= MSMg01no096_b12.b1 MSMg01no096_b12.b1 CHROMAT_FILE:
MSMg01no096_b12.b1 PHD_FILE: MSMg01no096_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:19 2005
(320 letters)
>mm_chr10_116066135_116066854
Length = 720
Score = 497 bits (257), Expect = e-145
Identities = 311/349 (89%), Gaps = 34/349 (9%)
Strand = Plus / Minus
Query: 3 gaattctttgtgatttccc--tgtgctttccccccgagtctggtgccctgacattacatg 60
||||||||||||| || | |||||||| ||||||||||||||||||||||||||||||
Sbjct: 374 gaattctttgtga--tcacagtgtgcttt-cccccgagtctggtgccctgacattacatg 318
Query: 61 tggtcttactttataaatctcaacagcctagtgttttgttgagtttccttctaagttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggtcttactttataaatctcaacagcctagtgttttgttgagtttccttctaagttaaa 258
Query: 121 tcttccagatgcacagaactcggtgggcagagggaagaaggtg----------------- 163
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tcttccagatgcacagaactcggtgggcagagggaagaaggtgtggttaaggacatccct 198
Query: 164 ------------tgtaaaggacagggtgaggtaaatgaatgctggcacggttccctctgt 211
|||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 197 ggtttgttggtttgtaaaggacagggtgaggtaaatgaatgctgacacggttccctctgt 138
Query: 212 cacagcagtctgctgcttgactaaaactgtcacaggcagcatgtgtgcccgagggaggaa 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cacagcagtctgctgcttgactaaaactgtcacaggcagcatgtgtgcccgagggaggaa 78
Query: 272 tccagttggtcatgccacttggtttttaaacagtcagacatttcagaaa 320
||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tccaggtggccatgccacttggtttttaaacagtcagacatttcagaaa 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_b12.g1 MSMg01no096_b12.g1 CHROMAT_FILE:
MSMg01no096_b12.g1 PHD_FILE: MSMg01no096_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:20 2005
(408 letters)
>mm_chr10_115907082_115907889
Length = 808
Score = 729 bits (377), Expect = 0.0
Identities = 404/421 (95%), Gaps = 13/421 (3%)
Strand = Plus / Plus
Query: 1 attttgaagcccggtggttgttcttgcacaacagatgagcacgttttccaaggcactaat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 attttgaagcccggtggttgttcttgcacaacagatgagcacattttccaaggcactaat 260
Query: 61 cttcatctcttggatacgcattagaaccacctgcacggctttgaaaactacaacactcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcatctcttggatacgcattagaaccacctgcacggctttgaaaactacaacactcag 320
Query: 121 gccccatccctgaccacatcaatgtgcctgaaaactgaacctaagcccaaaaaggtgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccccatccctgaccacatcaatgtgcctgaaaactgaacctaagcccaaaaaggtgatc 380
Query: 181 ctcaaggtccttgagtaatcccacagcgtagctgaggaccagagcactcggcacccacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcaaggtccttgagtaatcccacagcgtagctgaggaccagagcactcggcacccacca 440
Query: 241 ctctgagtcacagatgtgatgcaatgctggggcagcagcaagaggacgctaacaccggaa 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgagtcacagaggtgatgcaatgctggggcagcagcaagaggacgctaacaccggaa 500
Query: 301 cgtacactgggctatgggtgatccatcag-------------tccctgcctgatccgaat 347
|||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 cgtagactgggctatgggtgatccatcagctcctttatcaagtccctgcctgatccgaat 560
Query: 348 actgtgccatgaaacacagtgatcccctgagataacaaggatttgatgaaaaacgtaaag 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgtgccatgaaacacagtgatcccctgagataacaaggatttgatgaaaaacgtaaag 620
Query: 408 a 408
|
Sbjct: 621 a 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
