Query= MSMg01no098_c18.b1 MSMg01no098_c18.b1 CHROMAT_FILE:
MSMg01no098_c18.b1 PHD_FILE: MSMg01no098_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:11 2005
(440 letters)
>mm_chr10_42803912_42804751
Length = 840
Score = 801 bits (414), Expect = 0.0
Identities = 417/418 (99%)
Strand = Plus / Plus
Query: 1 ctagacagactaagataccgtcttgggtattagcacaggtttctatagctcttctgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagacagactaagataccgtcttgggtattagcacaggtttctatagctcttctgtatt 260
Query: 61 atatatcaggctccatatcagcattctgtatatattaacggatttaatacaggtgattag 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 atatatcaggctccatatcagcattctctatatattaacggatttaatacaggtgattag 320
Query: 121 tgccgcacaaaagaaaagtctagagctagctaatattatctctagtttacctatgaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccgcacaaaagaaaagtctagagctagctaatattatctctagtttacctatgaggga 380
Query: 181 actgaggcagagagagagagatgatgtaatgcatggattcacacagataacaaacagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgaggcagagagagagagatgatgtaatgcatggattcacacagataacaaacagtag 440
Query: 241 aactagaattcacacccaagcagtctggctctcgaatctgatgtcatagatcctgactgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactagaattcacacccaagcagtctggctctcgaatctgatgtcatagatcctgactgt 500
Query: 301 ttatttctcctgtgttgtcagctaaagaagtccctgtgttataaattgtgaacactggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatttctcctgtgttgtcagctaaagaagtccctgtgttataaattgtgaacactggtg 560
Query: 361 tcactaaattgtgtgcatgcatgcataaatgcatgtgtgtgtgtgtgtgtgtgtgtgt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcactaaattgtgtgcatgcatgcataaatgcatgtgtgtgtgtgtgtgtgtgtgtgt 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_c18.g1 MSMg01no098_c18.g1 CHROMAT_FILE:
MSMg01no098_c18.g1 PHD_FILE: MSMg01no098_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:11 2005
(285 letters)
>mm_chr10_42836023_42836706
Length = 684
Score = 325 bits (168), Expect = 2e-93
Identities = 171/172 (99%), Gaps = 1/172 (0%)
Strand = Plus / Minus
Query: 1 tctggttagttggaactgatttgagctttcctctgatgtgtttgtctcgcccctaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 371 tctggttagttggaactgatttgagctttcctctgatgtgtttgtct-gcccctaagctc 313
Query: 61 ctcaggctatgaggaagggcaaccatgacaatgaaagtctgagaagagagaggtcaccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctcaggctatgaggaagggcaaccatgacaatgaaagtctgagaagagagaggtcaccca 253
Query: 121 agtgacagctgatggcaggagctggcacatgtctggtagagaggcagccatg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 agtgacagctgatggcaggagctggcacatgtctggtagagaggcagccatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
