Query= MSMg01no098_n19.b1 MSMg01no098_n19.b1 CHROMAT_FILE:
MSMg01no098_n19.b1 PHD_FILE: MSMg01no098_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:06 2005
(492 letters)
>mm_chr10_75216972_75217863
Length = 892
Score = 913 bits (472), Expect = 0.0
Identities = 484/488 (99%)
Strand = Plus / Minus
Query: 5 gaattccttcttacattcgaattgcagccttaaatgccagctccacgattgaggatgacc 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaattccttcctagattcgaattgcagccttaaatgccagctccacgattgaggatgacc 633
Query: 65 atgaaggaagcttcaaaagtcacaaaatccagacaaaggaggctcaggtatgcactctga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgaaggaagcttcaaaagtcacaaaatccagacaaaggaggctcaggtatgcactctga 573
Query: 125 ggtctgcttccgaggaagctcctgctgctcagcttaaatgaatcccttgtgtcctcagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ggtctgcttccgaggaagctcctgctgctcagcttaaatgaatcccttgtgtcctcagag 513
Query: 185 gagttgtaagggggatggcgcgctgcagacggccgcctctccacctcaggtcggacttgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gagttgtaagggggatggcgcgctgcagacggccgcctctccacctcaggtcggacttgt 453
Query: 245 ttccctcgggagatggtcatgctgaagaactaactgaatgctctttgtgttgttgccttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ttccctcgggagatggtcatgctgaagaactaactgaatgctctttgtgttgttgccttt 393
Query: 305 tacctaccacctgccctcccccttgtgcgtgcgtgcgtgcgtgtgcacacgggactctac 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 392 tacctaccacctgccctcccccttgtgtgtgcgtgcgtgcgtgtgcacacgggactctac 333
Query: 365 agcaatgaggtctgagcactgagtagtagattttctttgactgcagaggctgtagctgac 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agtaatgaggtctgagcactgagtagtagattttctttgactgcagaggctgtagctgac 273
Query: 425 agcttagcagtcactcagagcctccctttgcgtacatttggatgtgaaaggctctgttct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcttagcagtcactcagagcctccctttgcgtacatttggatgtgaaaggctctgttct 213
Query: 485 gtgtgctg 492
||||||||
Sbjct: 212 gtgtgctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_n19.g1 MSMg01no098_n19.g1 CHROMAT_FILE:
MSMg01no098_n19.g1 PHD_FILE: MSMg01no098_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:06 2005
(474 letters)
>mm_chr10_75065904_75066777
Length = 874
Score = 880 bits (455), Expect = 0.0
Identities = 470/475 (98%), Gaps = 1/475 (0%)
Strand = Plus / Plus
Query: 1 actctgtagac-aggctagccttgaactcagaaatttacctgcctctgcctcccaactgc 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 actctgtagaccaggctagccttgaactcagaaatttacctgcctctgcctcccaactgc 259
Query: 60 tgggattaaaggtgtgcgccaccatgcccagcttgggaagggttctttagaagaactcac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgggattaaaggtgtgcgccaccatgcccagcttgggaagggttctttagaagaactcac 319
Query: 120 tttgttatggcttgtccagagcagccccccacaaagggtcagtatgtctcatggacaggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttgttatggcttgtccagagcagccccccacaaagggtcagtatgtctcatggacaggc 379
Query: 180 tgtgaaaccctgggctttggggacagcatctggtcatggggagacttggaccccctgacc 239
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 380 tgtgaaaccctgggctttggggacagcatctggtcatggggatacttggaccccctgacc 439
Query: 240 ttctggggtgtgatagaaagttaatttgggcggagactgagtaagaggatgttccaaagg 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 ttctggggtgtgatagaaagttaatttgggcggagactgagtaaggggatgttccaaagg 499
Query: 300 gaagaccagtcttggggagcccaatggatatgggttgatggaacaggaatcctgggccca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagaccagtcttggggagcccaatggatatgggttgatggaacaggaatcctgggccca 559
Query: 360 gtttattacagggcagagtaggctctgcggtgggagtgttgtagcctcggcttcattctg 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtttattagagggcagagtaggctctgcggtgggagtgttgtagcctcggcttcattctg 619
Query: 420 cctattgtaatgatcagtacctgatagtagtctttctgtgtcgacttttacggaa 474
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 cctattgtaatgatcagtacctgatagcagtctttctgtgtcgacttttacggaa 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
