Query= MSMg01no099_k19.b1 MSMg01no099_k19.b1 CHROMAT_FILE:
MSMg01no099_k19.b1 PHD_FILE: MSMg01no099_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:16 2005
(217 letters)
>mm_chr10_65565200_65565817
Length = 618
Score = 350 bits (181), Expect = e-101
Identities = 205/215 (95%), Gaps = 7/215 (3%)
Strand = Plus / Plus
Query: 5 gaattctctagtgttacccg-t--aatatggcttcca-ctaagtggggcaaaatgtaagt 60
||||||||||||| || | | ||||||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattctctagtggta---gatgcaatatggcttccaactaagtggggcaaaatgtaagt 261
Query: 61 gctaaggtttttcccgtatgggcagaaaatgggttgacacaacataccagaaactctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gctaaggtttttcccgtatgggcagaaaatgggttgacacaacataccagaaactctgta 321
Query: 121 caggaagatctcactttcactacgatgaagaaagccaacatctagggctcagtcagtagg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 322 caggaagatctcactttcactacaatgaagaaagccaacatctagggctcagtcagtagg 381
Query: 181 ttattttaatattcctattgaacacgtaagttggc 215
|||||||||||||||||||||||||| ||||||||
Sbjct: 382 ttattttaatattcctattgaacacgcaagttggc 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 618
Length adjustment: 9
Effective length of query: 208
Effective length of database: 609
Effective search space: 126672
Effective search space used: 126672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no099_k19.g1 MSMg01no099_k19.g1 CHROMAT_FILE:
MSMg01no099_k19.g1 PHD_FILE: MSMg01no099_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:16 2005
(153 letters)
>mm_chr10_65705275_65705827
Length = 553
Score = 271 bits (140), Expect = 2e-77
Identities = 149/152 (98%)
Strand = Plus / Minus
Query: 1 acttgctgcaagtatattgatttccatgtgaccgctagcaatattgtattttgtatctac 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 352 acttgctgcaagtatattgatttccatgtgaccgttagcaatattgtattttgtatctac 293
Query: 61 cttgctatttttccttgccctccataagcagaattataactgcttaagtcaaaataaaga 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 292 cttgctatttttccttgccctccataagcagaattataactgtttaagtcaaaataaaga 233
Query: 121 caaagaattgcattgtggctttttcatttctg 152
||||||||||||||||||| ||||||||||||
Sbjct: 232 caaagaattgcattgtggccttttcatttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
