Query= MSMg01no100_b05.b1 MSMg01no100_b05.b1 CHROMAT_FILE:
MSMg01no100_b05.b1 PHD_FILE: MSMg01no100_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:50 2005
(554 letters)
>mm_chr10_66477036_66477990
Length = 955
Score = 998 bits (516), Expect = 0.0
Identities = 543/552 (98%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 4 ggaattccactgaaagacggaagtgagcagacagatgaagaagcggaggggccattctcc 63
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 755 ggaattccactgaaagatggaagtgagcagacagacgaagaagcggaggggccattctcc 696
Query: 64 gatgacgagatggtgactcacaaggcgctgaggcgatcccagagcatgaaatctgtcaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gatgacgagatggtgactcacaaggcgctgaggcgatcccagagcatgaaatctgtcaag 636
Query: 124 accatcaaaggccgcaaagaggtcagtgtgcactgggtaatgcttttcccgacgatgtgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 635 accatcaaaggccgcaaagaggtcagtgtgcactgggtaatgcttttcccgacaatgtgt 576
Query: 184 gtgaggagggatttcttccttcctactttgtcatcacagctgtgaagtgatcagcggacg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtgaggagggatttcttccttcctactttgtcatcacagctgtgaagtgatcagcggacg 516
Query: 244 aaggattcaaatgagagtgtagcgttatagttcaaattctttattaaaagcagatgtgtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 515 aaggattcaaatgagagtgtagcgttatagttcaaattctttattaaaagcaggtgtatt 456
Query: 304 agggatctctagggacaa-tttttttttcctggaaattttgaaataggaaactttttttt 362
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agggatctctagggacaattttttttttcctggaaattttgaaataggaaactttttttt 396
Query: 363 atcttgtgctctacatagaaaaagtgtcattcccacacggcaaaccccacggcttttgta 422
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 395 atcttgtgctctacatagaaaaagtgtcattcccacacagcaaaccccatggcttttgta 336
Query: 423 aatctctattgctttctctgtgcccgagcagagaaagctgctgacaaaattaactgcata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aatctctattgctttctctgtgcccgagcagagaaagctgctgacaaaattaactgcata 276
Query: 483 gttttgctttcaagaagccctatgtgatgattaaatagtagccatttacctgtaatcaca 542
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 275 gttttgctttcaagaagccctatgtgatgattaaatagtagcaatttacctgtaatcaca 216
Query: 543 cggtgtcgttgg 554
||||||||||||
Sbjct: 215 cggtgtcgttgg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 955
Length adjustment: 10
Effective length of query: 544
Effective length of database: 945
Effective search space: 514080
Effective search space used: 514080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no100_b05.g1 MSMg01no100_b05.g1 CHROMAT_FILE:
MSMg01no100_b05.g1 PHD_FILE: MSMg01no100_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:50 2005
(526 letters)
>mm_chr10_66420763_66421689
Length = 927
Score = 980 bits (507), Expect = 0.0
Identities = 522/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 aggtagcgaggcttgcggtcggccaccatgactattaagcaggtctagggcatcatcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtagcgaggcttgcggtcggccaccatgactattaagcaggtctagggcatcatcgtt 260
Query: 61 taaatcgtttaaaaacaaggtcccgggtggaaagctgcaaaagcgagcatcgtgcaggga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 taaatcgtttaaaaacaaggtcccgggtggaaagctgcaaaagtgagcatcgtgcaggga 320
Query: 121 cactcagagtgtgggaaaagctggtcaagtcaagtttcatcactaccctgccggggctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactcagagtgtgggaaaagctggtcaagtcaagtttcatcactaccctgccggggctgg 380
Query: 181 accacaggaaagatgccgataaacttccaggtaatccttatgtgcatatcaatgatctga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accacaggaaagatgccgataaacttccaggtaatccttatgtgcatatcaatgatctga 440
Query: 241 aaagggagaaagcccaagttcagcagttgagtgaagctcacagtatgccttcgggcacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagggagaaagcccaagttcagcagttgagtgaagctcacagtatgccttcgggcacat 500
Query: 301 cacattaaatgcaccatcaaaatgtcctttcatttggctacagctgccacctttttggaa 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacattaaatgcaccttcaaaatgtcctttcatttggctacagctgccacctttttggaa 560
Query: 361 aaaaaaaaaa-gaatcccgagacacttctagaagcatgcatgtacgtctaccatctttat 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaaaaaaaagaatcccgagacacttctagaagcatgcatgtacgtctaccatctttat 620
Query: 420 gatgtaaagctaagcgcgtccatgagcacgcgtgtccaccatcttttcttcaccaactga 479
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 621 gatgtaaagctaagcgcgtccatgagcacgcgtgtctaccatcttttcttccccaactga 680
Query: 480 gcatgcgtgggagtgtgcccacctcctctgaactccctgaataaaac 526
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcatgcgtgggagtgtgcccacctcctctgaactccctgaataaaac 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 927
Length adjustment: 10
Effective length of query: 516
Effective length of database: 917
Effective search space: 473172
Effective search space used: 473172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
