Query= MSMg01no105_m15.b1 MSMg01no105_m15.b1 CHROMAT_FILE:
MSMg01no105_m15.b1 PHD_FILE: MSMg01no105_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:32 2005
(269 letters)
>mm_chr10_117047208_117047876
Length = 669
Score = 497 bits (257), Expect = e-145
Identities = 266/269 (98%)
Strand = Plus / Plus
Query: 1 ggcctgatctcacaactggagtgccttccattatgtacaaaagaatgtgttgacccaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcctgatctcacaactggagtgccttccattatgtacaaaagaatgtgttgacccaatg 260
Query: 61 atggaggataaggcgattaatagtctgtctcctgccttcagtggtttaccaattgctaga 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggaggataaggtgattaatagtctgtctcctgccttcagtggtttaccaattgctaga 320
Query: 121 gggatatgtgtgcccacaccttagtctgttttgtcatcactgagaccaatactgggccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatatgtgtgcccacaccttagtctgttttgtcatcactgagaccaatactgggccaa 380
Query: 181 gacaacttataggagaaagaatttcttctgctcacaatttcaccctactatggttgggag 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacaacttaaaggagaaagaatttcttctgctcacaatttcaccctactatggttgggag 440
Query: 241 tggattgtgtaacagcccatatcatggtg 269
||||||||| |||||||||||||||||||
Sbjct: 441 tggattgtggaacagcccatatcatggtg 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no105_m15.g1 MSMg01no105_m15.g1 CHROMAT_FILE:
MSMg01no105_m15.g1 PHD_FILE: MSMg01no105_m15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:32 2005
(167 letters)
>mm_chr1_3523171_3523733
Length = 563
Score = 277 bits (143), Expect = 3e-79
Identities = 158/165 (95%), Gaps = 4/165 (2%)
Strand = Plus / Plus
Query: 3 tacatagcccaaactggctttggactctaccactccatgtagcctttagctttctgatgt 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 203 tacatagcccaaactggctttggactctaccactccatgtagcctttagctttctgattt 262
Query: 63 cactgcagaactgaaacgcttatagaaaggaagctgccatcgatcgacatgctcatgaaa 122
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 263 cactgcagaactgaaacgcttatagaaaggaagctgtcatcgat----atgctcatgaaa 318
Query: 123 ccaattacatctctgaaagtatcaccttttcagtagaaacttaat 167
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 319 ccaattacatctctgaaagtatcaccttttcagtagacacttaat 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 563
Length adjustment: 8
Effective length of query: 159
Effective length of database: 555
Effective search space: 88245
Effective search space used: 88245
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
