Query= MSMg01no105_n17.b1 MSMg01no105_n17.b1 CHROMAT_FILE:
MSMg01no105_n17.b1 PHD_FILE: MSMg01no105_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:37 2005
(521 letters)
>mm_chr10_113067335_113068256
Length = 922
Score = 895 bits (463), Expect = 0.0
Identities = 508/523 (97%), Gaps = 2/523 (0%)
Strand = Plus / Plus
Query: 1 tgatctgaaacattatgtcgctgggaaaagcagaagctctcattctccccagtcatttgc 60
|||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 200 tgatctgaaacattatgttgctgggaaaagcagaagctctcagtctatccagtcatttgc 259
Query: 61 ttgggtgggggaggaccaactctattttacactcatgaattactcaggtcccaaatatac 120
|||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||
Sbjct: 260 ttgggtgggggaggaccaactctattttgcactcatgagtttctcaggtcccaaatatac 319
Query: 121 ttgaggttggcacattcacacagatgtagtgctgcattcaagtgtctcatatttacccca 180
||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 320 ttgaggttggcgcattcacacagatgtagtgctgcattcaagtgtcccatatttacccta 379
Query: 181 tctcctaaatttgctctttacaatgctagtcccaagtacacaaattgcttggagccacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctcctaaatttgctctttacaatgctagtcccaagtacacaaattgcttggagccacct 439
Query: 241 gaattttattatattatttttt-ctgtatacattaagttttggattcttaccttggctac 299
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 440 gaattttattatattatttttttctgtatacattaagttttggattgttaccttggctac 499
Query: 300 aatctttcaatctttttaaaaagttcataatatagttgatcatttacaaacctacattct 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 500 aatctttcaatcttttaaaaaagttcataatatagttgatcatttacaaacctccattct 559
Query: 360 tacatgc-actagcatcaagagtttattttgaaaaatctactctgatgttcatgaaggag 418
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacatgccactagcatcaagagtttattttgaaaaatctactctgatgttcatgaaggag 619
Query: 419 aaaagcctgtgactttagtgactctcttcaaggaacccttgtatatctttgaagtcacct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaaagcctgtgactttagtgactctcttcaaggaacccttgtatatctttgaagtcacct 679
Query: 479 tttgctcttagcattatgtgatgtttgccccaaagtgatatct 521
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttgctcttagcattatgtgatgtttgccccaaagtgatatct 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_n17.g1 MSMg01no105_n17.g1 CHROMAT_FILE:
MSMg01no105_n17.g1 PHD_FILE: MSMg01no105_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:37 2005
(240 letters)
>mm_chr10_113228767_113229406
Length = 640
Score = 439 bits (227), Expect = e-128
Identities = 236/239 (98%)
Strand = Plus / Minus
Query: 1 tttgttataaatccacaaaatattattttaaagtaggcaaaagtagacaactttcttgaa 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 439 tttgttataaatccacaaaatattactttaaagtaggcaaaagtagacaactttcttgaa 380
Query: 61 gcaggaaatttagggtgtgttttagtatttagttgtatttctatttatgcctatacatgt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcaggaaatttagggtgttttttagtatttagttgtatttctatttatgcctatacatgt 320
Query: 121 gtatctgtatgtatgtgccttgtccatgcttagtagctgaggaagccagaagccagtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtatctgtatgtatgtgccttgtccatgcttagtagctgaggaagccagaagccagtgtc 260
Query: 181 aggtcctctgaagtgggagctataggctgttgctgctaccttcctgatgcaggcaatga 239
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 259 aggtcctctgaagtgggagctataggctgttgctgctaccttcctgacgcaggcaatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
