Query= MSMg01no107_b15.b1 MSMg01no107_b15.b1 CHROMAT_FILE:
MSMg01no107_b15.b1 PHD_FILE: MSMg01no107_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:29 2005
(359 letters)
>mm_chr10_41095421_41096178
Length = 758
Score = 621 bits (321), Expect = 0.0
Identities = 348/359 (96%), Gaps = 5/359 (1%)
Strand = Plus / Minus
Query: 1 tacacatgtatagtcatcccatgcagctatacagtgtacatatggaagtcagaggacaac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tacacgtgtatagtcatcccatgcagctatacagtgtacatatggaagtcagaggacaac 497
Query: 61 actgggtggcagtcttcaccctctctcttgtctggggcgatgtctcctcctcttcactgc 120
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 496 actgggtggcagtcttcaccatctctcttgtctggtgcaatgtctcctcctcttcactgc 437
Query: 121 tgcctgcctgtcccgaaagcttccagggattcccagtttccacgcccctcccccttccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgcctgcctgtcccgaaagcttccagggattcccagtttccacgcccctcccccttccca 377
Query: 181 aagagcttaggcacagataatatgcctctgacttcatgtgggccctgagattcaaactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aagagcttaggcacagataatatgcctctgacttcatgtgggccctgagattcaaactca 317
Query: 241 ggtactcgtatgcatggcaggtggtttaacccatggattt--cttcccccaagccttaaa 298
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 316 ggtactcgtatgcatggcaggtggtttaacccacgga---gccttcccccaagccttaaa 260
Query: 299 taaacagtttctaaaactgagacggtcccttcagtgcatcacttcacggggaagctgca 357
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 259 taaacagtttctaaaactgagacggtcccttcagtgcatcagttcacggggaagctgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 758
Length adjustment: 9
Effective length of query: 350
Effective length of database: 749
Effective search space: 262150
Effective search space used: 262150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_b15.g1 MSMg01no107_b15.g1 CHROMAT_FILE:
MSMg01no107_b15.g1 PHD_FILE: MSMg01no107_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:29 2005
(534 letters)
>mm_chr10_40937058_40937991
Length = 934
Score = 924 bits (478), Expect = 0.0
Identities = 520/534 (97%)
Strand = Plus / Plus
Query: 1 aacctacctcagacatcccaacaccaggcatagcaagtctcactggggcccccaacacca 60
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 201 aacctacctcagacatcccaacaccagacatagcaagtctcacttgggcccccaacacca 260
Query: 61 ggcaaggcaaatctcactggggccccccaatgacaggcatagaaagtctcactgggtcct 120
||| |||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 261 ggcgaggcaaatatcactggggccccccaatgataggcataaaaagtctcattgggtcct 320
Query: 121 tttaacttggcaagcgccacaggtgcaaaggaaaaggggcaacgtggaaagcctccttat 180
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tttaacttggcaagtgccacaggtgcaaaggaaaaggggcaatgtggaaagcctccttat 380
Query: 181 gtcacaagtcatcagggatcaaagaaacaagggcagaccatggcaggtgagggggcaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcacaagtcatcagggatcaaagaaacaagggcagaccatggcaggtgagggggcaaca 440
Query: 241 gaagaggggtacacttggagtcaggaagacagtgaaactggtatgacgcggggacttcat 300
|||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 441 gaagaggggtacacttggtgtcaggaagacagtgaaactggtaggacacggggacttcat 500
Query: 301 acagactctgggagagtggagaggaggtgggctgaggtttagtatatttcaagaaatatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagactctgggagagtggagaggaggtgggctgaggtttagtatatttcaagaaatatt 560
Query: 361 taccaagcacacaatttaaggcctgttatgaagatcaatggggactcagagacaggttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taccaagcacacaatttaaggcctgttatgaagatcaatggggactcagagacaggttac 620
Query: 421 cctcattgaatgatctagcaggtctgtaataacccagatatttagcaaggaagtttcagt 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 cctcattgaatgatctagcaggcctgtaataacccagatatttagcaaggaagtttcagt 680
Query: 481 ataactgtacaaggaaagatggtgtgtgtgcatgcacacgtgtgcatgcatgtg 534
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 ataactgtacaaggaaagatggtgtgtgtgcacgcacacgtgtgcatgcatgtg 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
