Query= MSMg01no108_g12.b1 MSMg01no108_g12.b1 CHROMAT_FILE:
MSMg01no108_g12.b1 PHD_FILE: MSMg01no108_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:15 2005
(654 letters)
>mm_chr10_112843636_112844692
Length = 1057
Score = 1133 bits (586), Expect = 0.0
Identities = 636/654 (97%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactatccatcttttcatggatactgtaaaaacattctatgcttgatatcttct 63
|||| ||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaactcactatccatattttcatggacactataaaaacattctatgcttgatatcttct 263
Query: 64 aagatctgcactttattttctgcatgacatgaatttttatttagtatttataatttcagt 123
|| ||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 264 aatatctgcactttattttctgcatgtcgtgaatttttatttagtattgataatttcagt 323
Query: 124 taatattttatttctctcaggaaagtatgagtaatcaaaattgggggataatttctcatg 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 taatattttatttctctcaggaaagtatgagtaatcaaaattgggggatgatttctcatg 383
Query: 184 aacgtttagacttaaataatttcttagctctacaaatcctttgaaatcttcatcttacct 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacgtttaggcttaaataatttcttagctctacaaatcctttgaaatcttcatcttacct 443
Query: 244 tcctatagcatactatccagaattctgaatataattaaaatgaaatatttttgctccaat 303
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 444 tcctatagcatactatccagaattctgaatataattaaaaagaaatctttttgctccaat 503
Query: 304 tgcctgagtttctgctgagttctagtttgtgctttattattcatttattagttatgaatt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcctgagtttctgctgagttctagtttgtgctttattattcatttattagttatgaatt 563
Query: 364 gcttcttttgaaataaggtttggttctgaagcccacgcccaccaaacctgcagtatactt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcttcttttgaaataaggtttggttctgaagcccacgcccaccaaacctgcagtatactt 623
Query: 424 cctgcctcatttccagagcactatgattgcagatgcgagccaccactcttgatgtgttct 483
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 624 cctgcctcatttccagagcactatgattgcagatgcgagccaccgctcttgatgtgttct 683
Query: 484 ctaagtttccctttaatttgctgtattccatgcttttggaagaaaaaaaaaa---gattc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 684 ctaagtttccctttaatttgctgtattccatgcttttggaagaaaaaaaaaaaaagattc 743
Query: 541 ttagttgagtttctgctttgatctctttatttttgccctaatccttgtgaccattattta 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 744 ttagttgagtttctgctttgatctctttatttttgccctaatccttgtgagcattattta 803
Query: 601 cttacaattattttttaaggcatttttattagatattttcctcatttacatttc 654
||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 cttacaattcttttttaaggcatttttattagatattttcctcatttacatttc 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1057
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1047
Effective search space: 674268
Effective search space used: 674268
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_g12.g1 MSMg01no108_g12.g1 CHROMAT_FILE:
MSMg01no108_g12.g1 PHD_FILE: MSMg01no108_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:16 2005
(593 letters)
>mm_chr10_112947647_112948638
Length = 992
Score = 1062 bits (549), Expect = 0.0
Identities = 579/589 (98%), Gaps = 1/589 (0%)
Strand = Plus / Minus
Query: 1 atagccactatgcctcaagatctccataccaagatccatgccagaaacttctatctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 941 atagccactatgcctcaagatctccataccaagatccatgccagaaacttctatctccca 882
Query: 61 gcctctaaactaggaccactggtgagccttccaattctggattgtagttcattccagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 gcctctaaactaggaccactggtgagccttccaattctggattgtagttcattccagata 822
Query: 121 tagtcaagttgaccatcaggaatagctactacaaccatactgttgaaattaaattaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tagtcaagttgaccatcaggaatagctactacaaccatactgttgaaattaaattaatca 762
Query: 181 ttttcattaatatgctaattactaataatttattagaaaggaagacaaaatttatgaatt 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttccattaatatgctaattactaataatttattagaaaggaagacaaaatttatgaatt 702
Query: 241 ctagagcatgcaattacttgaaaagagacttaccagaatatctgtgctgatcacgatcat 300
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 701 ctagagcatgcaattacttgaaaagagacttaccagaatatctgtgttaatcacgatcat 642
Query: 301 accgcatgcctctattcgtcaccaccatcccttgagaataataaacttaattggaagtgg 360
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 641 accgcatgcctctattcatcaccaccatcccttgagaataataaacttaaatggaagtgg 582
Query: 361 agatttatagtggagaggacactttcaatagaccaacgttgcagccccacaatacagaag 420
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 581 agatttatagtggagaggacactttcaatagaccaacgctgcagctccacaatacagaag 522
Query: 421 agctatctaagttcctagttgcttaagaactgaagtttttaagcagagaattatgtgcca 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 521 agctatctaagttcctagttgcttaagaactgaagttttaaagcagagaattatgtgcca 462
Query: 481 tgcatgttttcttaactcttctgagggaaatttcaagatatgatccccattaacactgca 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 461 tgcatgttttcttaactcttctgagggaaatttcaagata-gatccccattaacactgca 403
Query: 541 aagcataaacattgagataaaacaaaatcaaaaccaaaatagaaaatac 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aagcataaacattgagataaaacaaaatcaaaaccaaaatagaaaatac 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 992
Length adjustment: 10
Effective length of query: 583
Effective length of database: 982
Effective search space: 572506
Effective search space used: 572506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
