Query= MSMg01no109_e22.b1 MSMg01no109_e22.b1 CHROMAT_FILE:
MSMg01no109_e22.b1 PHD_FILE: MSMg01no109_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:28 2005
(563 letters)
>mm_chr10_104977821_104978783
Length = 963
Score = 797 bits (412), Expect = 0.0
Identities = 445/458 (97%), Gaps = 6/458 (1%)
Strand = Plus / Minus
Query: 5 gaattcatcaaattacattttgatcactttcaatattaaaatgtatgaggtcttttcctg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattcatcaaattatattttgatcactttcaatattaaaatgtatgaggtcttttcctg 600
Query: 65 tagctacctgctgaatacattacaggagtaagtcagtcaggcctacctgtcaatattggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tagctacctgctgaatacattacaggagtaagtcagtcaggcctacctgtcaatattggg 540
Query: 125 gatgtaagacgcgttaggaaggcgtcggtggcagaccttcagaaggtggggctgaacctt 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 539 gatgtaagacgcgttaggaaggcatcggtggcagaccttcagaaggtggggctgaacctt 480
Query: 185 aaagctctgtcaggg--acagagggctt-acctttagagagtacgtacagtaccgtgtct 241
||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 479 aaagctctgtcagggacacagagggcttaaccttt---gagtacgtactgtaccgtgtct 423
Query: 242 gccatccaggtctgtgtttctcttatcttactggaatagaggactgaactgtaactctca 301
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtcatccaggtctgtgtttctcttatcttactggaatagaggactgaactgtaactctca 363
Query: 302 gatgctggtttctgctttaaaaatttattttattgagacaggctgctatagatcccatac 361
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 362 gatgctggtttctgctttaaaaatttattttattgagacaggctgttatagatcccacac 303
Query: 362 tagtgaaggatttcctagatggccaagaatgactcttgctctttcctctcaggttctggt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tagtgaaggatttcctagatggccaagaatgactcttgctctttcctctcaggttctggt 243
Query: 422 tgtgggtgtatacctaggcctccttgtgtttttttttt 459
|||||||||||||||||| |||||||||||||||||||
Sbjct: 242 tgtgggtgtatacctagggctccttgtgtttttttttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_e22.g1 MSMg01no109_e22.g1 CHROMAT_FILE:
MSMg01no109_e22.g1 PHD_FILE: MSMg01no109_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:29 2005
(169 letters)
>mm_chr10_104904146_104904714
Length = 569
Score = 292 bits (151), Expect = 7e-84
Identities = 160/163 (98%)
Strand = Plus / Plus
Query: 1 ttatatttacccacgcccctttcctcacataatctactttgatgataaaaatgacttgtc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ttatatttacccacgcccctttcctcacataatctactttgatgataaaaatgagttgtc 260
Query: 61 tttgaaagcacaatcatggaaacagcttgaaggagaagaaagggctctgatgtccagctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgaaagcacaatcatggaaacagcttgaaggagaagaaagggctctgatgtccagctg 320
Query: 121 ggtgccaagtactgagaccaactattcagacgggggggggggg 163
||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 ggtaccaagtactgagaccaactattcagatgggggggggggg 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
