Query= MSMg01no126_c22.b1 MSMg01no126_c22.b1 CHROMAT_FILE:
MSMg01no126_c22.b1 PHD_FILE: MSMg01no126_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:28 2005
(442 letters)
>mm_chr10_85913341_85914182
Length = 842
Score = 816 bits (422), Expect = 0.0
Identities = 434/438 (99%)
Strand = Plus / Minus
Query: 5 gaattcatcttctcttgccacttgactatggacatgctgggactgcttcagttcttgtct 64
||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 818 gaattcatcttctcttgacgcttgactatggacatgcggggactgcttcagttcttgtct 759
Query: 65 tgcctttcccagaatgttgggctgtaacctggcgttataagccagaaagccctttcatct 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 758 tgcctttcccagaatgttgggctgtaacctggtgttataagccagaaagccctttcatct 699
Query: 125 ctcacttgcttttggataaggtcttgtaccacagcaacagaattgaaattagaatactta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ctcacttgcttttggataaggtcttgtaccacagcaacagaattgaaattagaatactta 639
Query: 185 tcaactttaaatattagtcatacgcctcataggccatttgctgtccccccctcaggcccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tcaactttaaatattagtcatacgcctcataggccatttgctgtccccccctcaggcccc 579
Query: 245 acaaatactgtaagtgggatggaatgtgctgactcccttgttgaagactcgtgatgaaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 acaaatactgtaagtgggatggaatgtgctgactcccttgttgaagactcgtgatgaaat 519
Query: 305 tctgcattgggtgagactagctacacacaattgaagagcacccatgggaaagaaacaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tctgcattgggtgagactagctacacacaattgaagagcacccatgggaaagaaacaaag 459
Query: 365 ggacaccttactttcagatcataccaaccattcctgtcccacaaaagtccagccccagtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggacaccttactttcagatcataccaaccattcctgtcccacaaaagtccagccccagtg 399
Query: 425 acatcttagcctgttaat 442
||||||||||||||||||
Sbjct: 398 acatcttagcctgttaat 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_c22.g1 MSMg01no126_c22.g1 CHROMAT_FILE:
MSMg01no126_c22.g1 PHD_FILE: MSMg01no126_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:28 2005
(432 letters)
>mm_chr10_85737869_85738700
Length = 832
Score = 735 bits (380), Expect = 0.0
Identities = 414/432 (95%), Gaps = 12/432 (2%)
Strand = Plus / Plus
Query: 1 ctgtgctgagttagtctgagattcaaatgataggcttagttggctctctagctgaaaatc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctgtgctgagttagtctgagattcaaatgataggcttagttgtctctctagctgaaaatc 260
Query: 61 aaagacacatgcacacagagagacagaaacaaatcagcgatacagagtgaaacagtcaca 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aaagacacatgcacacagagagacagaaacaaatcagcgatacagagagaaacagtcaca 320
Query: 121 ggcatacacacacacacacacacacacacacactcagagagagaaagagagagagagact 180
||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ggcat----------acacacacacacacacactcagagagagaa--agagagagagact 368
Query: 181 aagagagaaacagagagagacagcgatggagaagcacacacagagacagagacagaaaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gagagagaaacagagagagacagcgatggagaagcacacacagagacagagacagaaaac 428
Query: 241 aaagcatcgctttgtatccagtttcccaggtttattccagttgtgtggcagtggattgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaagcatcgctttgtatccagtttcccaggtttattccagttgtgtggcagtggattgca 488
Query: 301 gggaaagaatcgcaggcgattgtgtatgttcttgatatactgttggcttgcagaattaaa 360
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 489 gggaaagaatcgcaggcgattgtgtatgttcttgatatactgttggtttgcaaaattaaa 548
Query: 361 tagattaattctaaaacacatgcattatagatggacacagttgcacatgcataattcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 549 tagattaattctaaaacacatgcattatagatggacacagttgcacatgtataattcaag 608
Query: 421 cattcgagaaga 432
||||||||||||
Sbjct: 609 cattcgagaaga 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
