TTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCTGTGGCCCCTGGGGATGACAGAAGTCATAGTTCCATGATAACA
GGCTGAGAGAGGAAACTGGGAAATAAGAAAGCAAAGATTTTATGTCCTAT
AGATATTTGAAAAGTTTGCTCATGAAAGACAGATGATCCATTAGCTGTGG
GAAATATGATAGGTTCATGTGTGTGTGTGTGTGTCCAAGAGGCAATCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTGCCTATGCATATATATAGTGTCAAGATTCATGAAAAGAAAATTT
AGTAGGAAATTAATGGTATTTACTAGGACAATATACAACATTGATGAAGA
AGAAGAAGATACCCATGTAACAGTACCTGCCTCTGTGAAGAGGCATTTCT
CCTTTTCATATGGATAGAAGAGAGTAGAGGTGAGGAAGTATAAAAAGATT
CACATTTGGCCAAGAGAAGGTCTCCTAACTCTTGATTTGACGTCACACAG
GCTACTGATGGACGTTGTCTCACCCCGGGTTCCCTATTCCTGTCCCAATC
TGACGATCTACAATCCTATTTGGTTACGAAAGGTCTTATTTCGGCTCAAT
TCTCCACCTCGCTGTTCTCCCCTTAGGAAACTTACGACCGAATTCTCACC
CCGTCTG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAATGTCTTTGTTTCTAGACTTTT
GAGAAATGGCTCAACTCTTCCAACTATTTTGTCTTTTTTTTTCTCCTTTT
AAATATTTAATTTTTATTATTTTAAGTGGTGTGTGTGTGTGTGTGTGTGT
GTGGATATGGACTCCTGGCTGCCAGTGTCTGTGGAGTCAGAGGCATAGGA
TCCCTGGGAGCTGGATTTACAGGCAGTTGTGAGTCACTGAATATGGGTTC
TGAGAACAGAAATCAGGTCTTCTGCAAGTGTAATACGTGTTCTTAGCTGT
AGAGCCATCTCTCTGGACCTCATTTATGTTTTGTGAGACACTATATTTTT
TAAGGGACAGGAATATTTAGTGTTAAAAATGAAAGTGGCATTGACTGCTC
TGTCAAAACTTTGGTTTGTTTCCCAATTTAATTGATTTCTAGAACTGTCT
AAATAAACATTTATAGTTCATGACCAGTTTTTTAAATTATGTTTTTATTT
ATTCTCTGAGAATTTCATAAAATATATTTTGGTTATTTTCTTTCTTTTGT
CCCAGCTTTTCCCATATCTCCATCAATCTCCTGCTGAACTTCATGTTCTT
TCTCTAAACAAAATAACCACATTTTGTGTTGGTCAGTTCCT

Query= MSMg01no126_d04.b1 MSMg01no126_d04.b1 CHROMAT_FILE:
MSMg01no126_d04.b1 PHD_FILE: MSMg01no126_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:29 2005
         (269 letters)



>mm_chr10_91636202_91636870
          Length = 669

 Score =  491 bits (254), Expect = e-143
 Identities = 260/262 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcacctgtggcccctggggatgacagaagtcatagttccatgataacaggctgag 63
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacctgtggccattggggatgacagaagtcatagttccatgataacaggctgag 263

                                                                       
Query: 64  agaggaaactgggaaataagaaagcaaagattttatgtcctatagatatttgaaaagttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agaggaaactgggaaataagaaagcaaagattttatgtcctatagatatttgaaaagttt 323

                                                                       
Query: 124 gctcatgaaagacagatgatccattagctgtgggaaatatgataggttcatgtgtgtgtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctcatgaaagacagatgatccattagctgtgggaaatatgataggttcatgtgtgtgtg 383

                                                                       
Query: 184 tgtgtgtccaagaggcaatctctctctctctctctctctctctctctctctctctctctc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgtgtccaagaggcaatctctctctctctctctctctctctctctctctctctctctc 443

                                 
Query: 244 tctctctctctctctctctgcc 265
           ||||||||||||||||||||||
Sbjct: 444 tctctctctctctctctctgcc 465


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space:   171600
Effective search space used:   171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no126_d04.g1 MSMg01no126_d04.g1 CHROMAT_FILE:
MSMg01no126_d04.g1 PHD_FILE: MSMg01no126_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:29 2005
         (535 letters)



>mm_chr10_91693425_91694359
          Length = 935

 Score =  857 bits (443), Expect = 0.0
 Identities = 443/443 (100%)
 Strand = Plus / Minus

                                                                       
Query: 93  ttttaagtggtgtgtgtgtgtgtgtgtgtgtgtggatatggactcctggctgccagtgtc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 ttttaagtggtgtgtgtgtgtgtgtgtgtgtgtggatatggactcctggctgccagtgtc 876

                                                                       
Query: 153 tgtggagtcagaggcataggatccctgggagctggatttacaggcagttgtgagtcactg 212
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tgtggagtcagaggcataggatccctgggagctggatttacaggcagttgtgagtcactg 816

                                                                       
Query: 213 aatatgggttctgagaacagaaatcaggtcttctgcaagtgtaatacgtgttcttagctg 272
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 aatatgggttctgagaacagaaatcaggtcttctgcaagtgtaatacgtgttcttagctg 756

                                                                       
Query: 273 tagagccatctctctggacctcatttatgttttgtgagacactatattttttaagggaca 332
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tagagccatctctctggacctcatttatgttttgtgagacactatattttttaagggaca 696

                                                                       
Query: 333 ggaatatttagtgttaaaaatgaaagtggcattgactgctctgtcaaaactttggtttgt 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ggaatatttagtgttaaaaatgaaagtggcattgactgctctgtcaaaactttggtttgt 636

                                                                       
Query: 393 ttcccaatttaattgatttctagaactgtctaaataaacatttatagttcatgaccagtt 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttcccaatttaattgatttctagaactgtctaaataaacatttatagttcatgaccagtt 576

                                                                       
Query: 453 ttttaaattatgtttttatttattctctgagaatttcataaaatatattttggttatttt 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttttaaattatgtttttatttattctctgagaatttcataaaatatattttggttatttt 516

                                  
Query: 513 ctttcttttgtcccagcttttcc 535
           |||||||||||||||||||||||
Sbjct: 515 ctttcttttgtcccagcttttcc 493


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)