Query= MSMg01no127_e17.b1 MSMg01no127_e17.b1 CHROMAT_FILE:
MSMg01no127_e17.b1 PHD_FILE: MSMg01no127_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:59 2005
(368 letters)
>mm_chr10_49032103_49032870
Length = 768
Score = 673 bits (348), Expect = 0.0
Identities = 357/360 (99%)
Strand = Plus / Minus
Query: 6 gaattcacaatgcgcatttattagctacaagattgggtttctagctcagaatctgtctca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaattcacaatgcgtatttattagctacaagattgggtttctagctcagaatctgtctca 506
Query: 66 agtattctgtgcatctttgaaacacttcattgatttcttcttcatgtaattgattgtgat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtattctgtgcatctttgaaacacttcattgatttcttcttcatgtaattgattgtgat 446
Query: 126 gtaatagttgctgtggtgattaccttcaaggagcctgataggaactctggaaggatcaaa 185
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 gtaatagttgctgtggtgattaccttcaaggagcctgataggagctctggaaggatcaaa 386
Query: 186 cttggatgtgtactagacttaacctagtctatcactaaatacacattaatcgaactttca 245
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 cttggatgtgtactagacttaacctagtctatcactaaatacacattaattgaactttca 326
Query: 246 tagcttttcatggttgggaaacagaagcttgatcctctcctcagtggaatataatgctgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagcttttcatggttgggaaacagaagcttgatcctctcctcagtggaatataatgctgt 266
Query: 306 gaatttttaaatcaattaagatattataattcacttattaaaattgaaattcaatactat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaatttttaaatcaattaagatattataattcacttattaaaattgaaattcaatactat 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_e17.g1 MSMg01no127_e17.g1 CHROMAT_FILE:
MSMg01no127_e17.g1 PHD_FILE: MSMg01no127_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:39:59 2005
(476 letters)
>mm_chr10_48890079_48890955
Length = 877
Score = 851 bits (440), Expect = 0.0
Identities = 464/472 (98%), Gaps = 1/472 (0%)
Strand = Plus / Plus
Query: 1 tttgatgatctctgatatttgatatttgcctggctatgagtttctcactcacttaatttt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 tttgatgatctctgatatttgatatttgcctggctatgagtttcttactcacttaatttt 260
Query: 61 gttccacttcaaatgacaaaattttaaatcaagttcatataaattaattaaagaaataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttccacttcaaatgacaaaattttaaatcaagttcatataaattaattaaagaaataat 320
Query: 121 atctttcataacaatgaacagtgaatgcacaacattctttaattgtttatcattttgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctttcataacaatgaacagtgaatgcacaacattctttaattgtttatcattttgttc 380
Query: 181 caaattcattatgtaaatttatatggtgttgtaatgtctgaaaagtcacgtatagagtta 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaattcattatgtaaatttatgtggtgttgtaatgtctgaaaagtcacgtatagagtta 440
Query: 241 agtaatttttt-gaagaaaaagtgaatctcatatacggtttaacaatcaagaaaatacat 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtaatttttttgaagaaaaagtgaatctcatatacggtttaacaatcaagaaaatacat 500
Query: 300 acttggcttaacataacatgtatttatgatccactatcccccaaaaatgcctttcttaga 359
||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 501 acttggcttaacataacatgtatttatgacccactatctcctaaaaatgcctttcttaga 560
Query: 360 cttcttactcatttgaaatttaacgaacctaaagcaattatcacacaagcatctacttgg 419
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 cttcttactcatttgaaatttaacgaacctaaagcacttatcacacaagcatctacttgg 620
Query: 420 tacttgctctcatgtattaacacaaaatttctaaatgtaaactttcttgcca 471
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 tacttgctctcatgtattaacacaaaatttctaaatgaaaactttcttgcca 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 877
Length adjustment: 10
Effective length of query: 466
Effective length of database: 867
Effective search space: 404022
Effective search space used: 404022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
