Query= MSMg01no128_h05.b1 MSMg01no128_h05.b1 CHROMAT_FILE:
MSMg01no128_h05.b1 PHD_FILE: MSMg01no128_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:33 2005
(213 letters)
>mm_chr10_28291970_28292578
Length = 609
Score = 369 bits (191), Expect = e-107
Identities = 206/213 (96%), Gaps = 4/213 (1%)
Strand = Plus / Minus
Query: 1 tattgatggcatgatagagttaagtaggtttctgtgaaatttgttaagatttgtctgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tattgatggcatgatagagttaagtaggtttctgtgaaatttgttaagatttgtctgtat 350
Query: 61 ttggtatgggcagctctgtacagacagtgcgtgtgcaacatgcgggcaggaggtagtctc 120
|||||||||||||||| |||||||||||| ||||| |||||||||||||||| ||||
Sbjct: 349 ttggtatgggcagctcagtacagacagtgtgtgtggaacatgcgggcaggag----tctc 294
Query: 121 tgaccagggatgtaataagtgtacatcattctactataaataccaaaaaattatctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgaccagggatgtaataagtgtacatcattctactataaataccaaaaaattatctctcc 234
Query: 181 ttttttgggggaggagatggtgggggaggacag 213
|||||||||||||||||||||||||||||||||
Sbjct: 233 ttttttgggggaggagatggtgggggaggacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 609
Length adjustment: 9
Effective length of query: 204
Effective length of database: 600
Effective search space: 122400
Effective search space used: 122400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_h05.g1 MSMg01no128_h05.g1 CHROMAT_FILE:
MSMg01no128_h05.g1 PHD_FILE: MSMg01no128_h05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:33 2005
(195 letters)
>mm_chr10_28166816_28167410
Length = 595
Score = 368 bits (190), Expect = e-106
Identities = 193/194 (99%)
Strand = Plus / Plus
Query: 1 agcaaatatttctcgcagccagatgtctgattcatcaagatttatttctccattcatgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 agcaaatatttctcgcagccagatgtctgattcatcaagatttatttcaccattcatgtg 260
Query: 61 cagagatagtgagagaacagagctaacattagaggaataaatttattaaagctgtaaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagagatagtgagagaacagagctaacattagaggaataaatttattaaagctgtaaaac 320
Query: 121 ttttaccaacaccttccccctccgtcttcacaggtgaaattgagcatccattcagtcgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttaccaacaccttccccctccgtcttcacaggtgaaattgagcatccattcagtcgta 380
Query: 181 agtcatttatagcc 194
||||||||||||||
Sbjct: 381 agtcatttatagcc 394
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
