Query= MSMg01no132_c08.b1 MSMg01no132_c08.b1 CHROMAT_FILE:
MSMg01no132_c08.b1 PHD_FILE: MSMg01no132_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:34 2005
(649 letters)
>mm_chr10_32820372_32821420
Length = 1049
Score = 731 bits (378), Expect = 0.0
Identities = 430/450 (95%), Gaps = 5/450 (1%)
Strand = Plus / Plus
Query: 1 gagcagaagtacacatgatgaaaaatcatatacacacaatatatattcataaaatccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagcagaagtacacatgatgaaaaatcatatacacacaatatatattcataaaatccact 260
Query: 61 tagcaaaatgattatgtgagtcacacatattgttggcttaaaaaacaaaatgcaaaaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcaaaatgattatgtgagtcacacatattgttggcttaaaaaacaaaatgcaaaaata 320
Query: 121 gataatttttaaaaatattgagtttcttcattaaacagtatgtagaatgcatgaagagaa 180
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aataattttttaaaatattgagtttctttattaaacagtatgtagaatgcatgaagagaa 380
Query: 181 aatatttgatataattttcaattttaaattttctttttttttttttttggtttgtttgtt 240
||||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||
Sbjct: 381 aatatttgatataattttcaattttcaattttctttcttttttttattg-----tttgtt 435
Query: 241 tgtttgtttttgttttccagacagggtttctctgtgcagccctggctgtcctggaactca 300
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 436 tgtttgtttttgttttccagataggatttctctgtgcagccctggctgtcctggaactca 495
Query: 301 ctctgtagaacaggctggccttgaactcagaaatctgcctgcctttgcctccagagtact 360
|| |||||| ||||||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct: 496 ctttgtagaccaggctggcctcgaactccgaaatctgcctgcctctgcctccagagtact 555
Query: 361 gggattaaaggcgtgtgccaccatcgcccggctattttctttctttctttctttctttct 420
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 556 gggattaaaggtgtgtgccaccatcgcccagctattttctttctttctttctttctttct 615
Query: 421 ttctttctttctttctttctttctttcttt 450
||||||||||||||||||||||||||||||
Sbjct: 616 ttctttctttctttctttctttctttcttt 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_c08.g1 MSMg01no132_c08.g1 CHROMAT_FILE:
MSMg01no132_c08.g1 PHD_FILE: MSMg01no132_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:35 2005
(603 letters)
>mm_chr10_32958212_32959215
Length = 1004
Score = 1050 bits (543), Expect = 0.0
Identities = 558/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Minus
Query: 42 acaatgtaggtcaggcaaccttatacatcactatgaataaactttacacattttcactca 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acaatgtaggtcaggcaaccttatacatcactatgaataaactttacacattttcactca 745
Query: 102 caaagaagaaatgtctggagacaagttgacaaatgagtgagtaaatacacggtagtagac 161
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 744 caaagaagaaatgtctggagacaaggtgacaaatgagtgagtaaatacacggtagtagac 685
Query: 162 accacaatattttactcaagacagaatattcgcactgaaaacaaaaggaaataaaagatc 221
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 684 accacaatattttactcaagacagaatattcacactgaaaacaaaaggaaataaaagatc 625
Query: 222 tatgtggactgagaagggtaggaagttctatccttttaaatggatttgtagcattcccta 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatgtggactgagaagggtaggaagttctatccttttaaatggatttgtagcattcccta 565
Query: 282 aacacttggggatatcccaggagtctgagcaagatactcaaggacttttcactaggccat 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aacacttggggatatcccaggagtctgagcaagatactcaaggacttttcactaggccat 505
Query: 342 gaattgtaacaatcaaacaaaaacattttgtgtttcctagtttgtgatcaatgtactggt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 gaattgtaacaatcaaacaaaaacattttgtgtttcctagtttgtgatcaatgtattggt 445
Query: 402 gacttacagtttgctttggaattttacttaaaatttgaaacttataatttattcaatttg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gacttacagtttgctttggaattttacttaaaatttgaaacttataatttattcaatttg 385
Query: 462 tttagataaccaaaccaaaatatttatat-aaacctaacaggtcattgtaattcagaaga 520
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 tttagataaccaaaccaaaatatttatataaaacctaacaggtcattgtaattcagaaga 325
Query: 521 gacatgtgacccctccctgttttctgtcatcatttatttggctctatagcaagagaattg 580
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 gacatgtgacccctccctgttttctgtcatcatttatttggctctatagcaagagagttg 265
Query: 581 gatatttagcttgaactatttgg 603
|||||||||||||||||||||||
Sbjct: 264 gatatttagcttgaactatttgg 242
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
