Query= MSMg01no132_e20.b1 MSMg01no132_e20.b1 CHROMAT_FILE:
MSMg01no132_e20.b1 PHD_FILE: MSMg01no132_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:47 2005
(692 letters)
>mm_chr10_63114337_63115433
Length = 1097
Score = 1085 bits (561), Expect = 0.0
Identities = 595/609 (97%), Gaps = 5/609 (0%)
Strand = Plus / Minus
Query: 89 aaatccttgggaatgtcacacagtgcattccaatcatatcctccccaaactcaccccgct 148
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 aaatccttggaaatgtcacacagtgcattccaatcatatcctccccaaactcaccccgct 1038
Query: 149 aactcctcctcctctagctccctactcaccactaaggtttatgtcctcttctttttaaac 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 aactcctcctcctctagctccctactcaccactaaggtttatgtcctcttctttttaaac 978
Query: 209 agctcctcagatagggatgggggctcacttaacccttcccacttggcaccggaatttact 268
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 977 agctcctcagatagggatgggggctcacttagcccttcccacttggcaccggaatttact 918
Query: 269 ggttttaatcttatgcaggaactgtacatgcgatcacaggtaccctgagctcacagtatc 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ggttttaatcttatgcaggaactgtacatgcgatcacaggtaccctgagctcacagtatc 858
Query: 329 gtggtcctatcatggctagcaggtaagcaaatcttcttaaaggtga-----aagggaatg 383
|||||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 857 gtggtcctatcatggccagcaggtaggcaaatcttcttaaaggtgaaagggaagggaatg 798
Query: 384 agtggaaatcggacttatgctttagccctgacaacttccatatatgttttaagaactatg 443
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 797 agtggaaatcggacttatgctttagccctgatgacctccatatatgttttaagaactatg 738
Query: 444 gtgtcagataaaacatgagaagtctcctttaccaatgacttaacttccaagaatgagcga 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtgtcagataaaacatgagaagtctcctttaccaatgacttaacttccaagaatgagcga 678
Query: 504 ggcaggagaatggcacctgtcacttaatgctgcatggcttatagcagttacataaggaac 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggcaggagaatggcacctgtcacttaatgctgcatggcttatagcagttacataaggaac 618
Query: 564 ccaaccacaggcgtgaacatgagtcccttggaaggttaatctcaaatcaaaccaccaatc 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ccaaccacaggcgtgaacatgagtcccttggaaggttaatctcaaatcaaaccaccaatc 558
Query: 624 ccctgtgtgagtctatatgtgtgcctgtgcgtgtgcacatgtatgcacatgtgtgtgcac 683
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 557 ccctgtgtgagtctatgtgtgtgcctgtgcgtgtgcacatgtatgcatatgtgtgtgcac 498
Query: 684 agatgtgtg 692
|||||||||
Sbjct: 497 agatgtgtg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1097
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1087
Effective search space: 741334
Effective search space used: 741334
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_e20.g1 MSMg01no132_e20.g1 CHROMAT_FILE:
MSMg01no132_e20.g1 PHD_FILE: MSMg01no132_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:47 2005
(647 letters)
>mm_chr10_63009041_63010087
Length = 1047
Score = 984 bits (509), Expect = 0.0
Identities = 562/585 (96%), Gaps = 14/585 (2%)
Strand = Plus / Plus
Query: 1 tttgtctctcaaagaactggtttcttaatgtagaggaagtaactaagctgagatttcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtctctcaaagaactggtttcttaatgtagaggaagtaactaagctgagatttcaag 260
Query: 61 ggctttcagggaaagaggaaggttcaactcccttgtatactgtccacacaagccagaatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ggctttcagggaaagaggaaggttcaactcccttgtatactgtccacacaagccaggatg 320
Query: 121 ccagcttagatggagcacagtatcaaccctgcaagtactttagtgtgggttgtctggagc 180
|||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 321 ccagcttagatggaccacagtatcaacactgcaagtactttagtgtgggttatctggagc 380
Query: 181 tgggatgtgcagcctcacatccatcagtcttgatggctgtgcccacgagagccagcaact 240
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggatgtgcagccttacatccagcagtcttgatggctgtgcccacgagagccagcaact 440
Query: 241 gcacctaggtaccacaggcttcatggacatgtgtgagatgggagggaacctgcaaattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacctaggtaccacaggcttcatggacatgtgtgagatgggagggaacctgcaaattat 500
Query: 301 tggacatcctgccttcccatctatttttacttgtgggtatccaccaaagccacc-acaac 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 501 tggacatcctgccttcccatctatttttacttgtgggtatccaccaaagccaccga-aac 559
Query: 360 caattggagggatgctaaggttagttaagagcttttgaattcatcaagggccctctctct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 caattggagggatgctaaggttagttaagagcttttgaattcatcaagggccctctctct 619
Query: 420 cctaaatatagatggtggcatcttacattaaaacaaatgccttgtgctccagtgtgctca 479
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cctaaatatagatggtgccatcttacattaaaacaaatgccttgtgctccagtgtgctca 679
Query: 480 tgttgcagcctaccagaagcaagtatatatctgtatctgtatctgtatctgtatctgtat 539
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 680 tgttgcagcctaccagaagc-------tatctgtatctgtatctgtatctgtatctgtat 732
Query: 540 ctgtatctgtatc-tgtatctgtatctgtatctgtatctgtatct 583
||||||| ||| | |||||||||||| ||||||||||| ||||
Sbjct: 733 ctgtatc---atcatctatctgtatctgaatctgtatctg-atct 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
